PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026450820.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 271aa MW: 30593.2 Da PI: 9.5826

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026450820.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.6	5e-17	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++ +G+g+W++++ g+ R+ k+c++rw +yl XP_026450820.1 15 KGPWTPEEDLILASYIEGHGPGNWRSVPTNAGLSRCSKSCRLRWTNYL 62 79********************************************97 PP
2	Myb_DNA-binding	35	3.3e-11	68	110	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg++T+ E+ ++ + +++G++ W++Ia+ ++ Rt++++ ++w+ XP_026450820.1 68 RGNFTELEENNIITLQRLWGNK-WAAIASNLP-QRTDNDINNYWN 110 89******************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MGRPPCCDKV LGIKKGPWTP EEDLILASYI EGHGPGNWRS VPTNAGLSRC SKSCRLRWTN 60 YLRPGIKRGN FTELEENNII TLQRLWGNKW AAIASNLPQR TDNDINNYWN ANRKKKLKNK 120 FRSHHLGSSS TSLQFLNKNC RTLSHDRISN LEYHHLSIHQ NSALNKFIST ITSSSTSTPS 180 STTYASSTEN ISRLLEDCVK NSPNKFSSGA LKLKTTQTEE KVLPSGSNNS DNNNPNNGNN 240 NPPFSLLEKW LLDEATVQVL EEDQMEIYPK F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62470.2	1e-66	MYB family protein