PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026449634.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SRS

Protein Properties

Length: 352aa MW: 37945.4 Da PI: 8.2461

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026449634.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	214.1	3.3e-66	102	257	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaa.skrkrel...kskkqsalsstklss 93 gt+sCqdCGnqakkdC+h+RCRtCCksrgf+C thvkstWvpa++rrerqqq ++ ++ ++++e +r++ +++++ +s +l+ XP_026449634.1 102 GGTTSCQDCGNQAKKDCTHMRCRTCCKSRGFHCPTHVKSTWVPASRRRERQQQFSSIHQGGRSDRDERVvVVLDRDHistTNTSKRPRESHRLPA 196 6899************************************************99988887777444313444444211233333345667777 PP DUF702 94 aeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 ++++ + +P+ev+s+a frcvrvs++d++ee++aYqtav+igGhvfkGiLydqG+e+ XP_026449634.1 197 TNTTGLEVGNVFPAEVNSAATFRCVRVSAMDEAEEQYAYQTAVNIGGHVFKGILYDQGPES 257 77666666667**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MAGFSLGRSS ARNQSQEIPP ETLFLYRSGE IPSSTYNNSS KGFELWQEHN QHQNIYASSS 60 VALEVGLASG NRRSNVSDEF SNRAGTTMMM RQGGGEGSGD RGGTTSCQDC GNQAKKDCTH 120 MRCRTCCKSR GFHCPTHVKS TWVPASRRRE RQQQFSSIHQ GGRSDRDERV VVVLDRDHIS 180 TTNTSKRPRE SHRLPATNTT GLEVGNVFPA EVNSAATFRC VRVSAMDEAE EQYAYQTAVN 240 IGGHVFKGIL YDQGPESHYA HHHGGETSTS GAGGSESGGA GTGGGAITSS GRNFITAPHN 300 HPHMQQQQQQ PSSSSATTSG AAALLVDPSS MYPGTPFNTF VAGTQFFPHP RS

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MAGFSLGRSS ARNQSQEIPP ETLFLYRSGE IPSSTYNNSS KGFELWQEHN QHQNIYASSS  60
VALEVGLASG NRRSNVSDEF SNRAGTTMMM RQGGGEGSGD RGGTTSCQDC GNQAKKDCTH  120
MRCRTCCKSR GFHCPTHVKS TWVPASRRRE RQQQFSSIHQ GGRSDRDERV VVVLDRDHIS  180
TTNTSKRPRE SHRLPATNTT GLEVGNVFPA EVNSAATFRC VRVSAMDEAE EQYAYQTAVN  240
IGGHVFKGIL YDQGPESHYA HHHGGETSTS GAGGSESGGA GTGGGAITSS GRNFITAPHN  300
HPHMQQQQQQ PSSSSATTSG AAALLVDPSS MYPGTPFNTF VAGTQFFPHP RS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	2e-60	SRS family protein