PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026449512.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 493aa MW: 55797.8 Da PI: 7.495

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026449512.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.8	2.7e-26	199	286	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn+YA++vGFs+rks+s+++ ++++ +r f+Cskeg +e+++ ++r +trt+Cka+l+++ ++dg + v++++leHnHel+p XP_026449512.1 199 DFYNRYARSVGFSIRKSSSTHR-SDKTVSRRIFCCSKEGVYREHSRG--APMKPRLQTRTDCKARLVIRIQDDGSYSVAEFVLEHNHELVP 286 6**************99987.7778**********999988..999***********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MAKALVIDQN LTSTLQINEE EEEKEDSGYD ADVTGNKIPE ETNTSNSNTG ARRGGSRNNA 60 ATALKSKASE LTLSFEGKVY VFHKVNPEKV QAVLSILGGS DIPDGGQCPR CLNGSRRIAS 120 LVRFREKRKD RYYDKKFRNN AHKKVEQKMD KKSTKSPIEL NETFQTGGNI LMETNIGVSK 180 DIEVPKLGMI FQSDDEAYDF YNRYARSVGF SIRKSSSTHR SDKTVSRRIF CCSKEGVYRE 240 HSRGAPMKPR LQTRTDCKAR LVIRIQDDGS YSVAEFVLEH NHELVPPSEV HILRSHRKMR 300 EAQTGMFNNL QLVGTGATGF YSYMSAEDGK THNLSFTQVE SSNHLDKRSK NILMTGDVQI 360 MLDYFNCMQK ENPYFFYSIQ MDGNNQICGC FWSDAKSRID YSFFGDVVWV ETTFRTSDYD 420 KPCALFVGVN NHGQAIPFGC ALLWEETAES FVWLFQTFLE AMNGKPPESI FTDQAPQISD 480 AVGRVLPMFV AYL

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MAKALVIDQN LTSTLQINEE EEEKEDSGYD ADVTGNKIPE ETNTSNSNTG ARRGGSRNNA  60
ATALKSKASE LTLSFEGKVY VFHKVNPEKV QAVLSILGGS DIPDGGQCPR CLNGSRRIAS  120
LVRFREKRKD RYYDKKFRNN AHKKVEQKMD KKSTKSPIEL NETFQTGGNI LMETNIGVSK  180
DIEVPKLGMI FQSDDEAYDF YNRYARSVGF SIRKSSSTHR SDKTVSRRIF CCSKEGVYRE  240
HSRGAPMKPR LQTRTDCKAR LVIRIQDDGS YSVAEFVLEH NHELVPPSEV HILRSHRKMR  300
EAQTGMFNNL QLVGTGATGF YSYMSAEDGK THNLSFTQVE SSNHLDKRSK NILMTGDVQI  360
MLDYFNCMQK ENPYFFYSIQ MDGNNQICGC FWSDAKSRID YSFFGDVVWV ETTFRTSDYD  420
KPCALFVGVN NHGQAIPFGC ALLWEETAES FVWLFQTFLE AMNGKPPESI FTDQAPQISD  480
AVGRVLPMFV AYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-72	FAR1 family protein