PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026448443.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

G2-like

Protein Properties

Length: 503aa MW: 54705.7 Da PI: 6.443

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026448443.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87.4	1.4e-27	176	230	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH+rFv+aveqL G +kA+P++ile+m++++Lt+++++SHLQkYR++ XP_026448443.1 176 KVKVDWTPELHRRFVQAVEQL-GMDKAVPSRILEIMGIDCLTRHNIASHLQKYRSH 230 5689***************.******************************86 PP
2	Myb_DNA-binding	39.6	1.2e-12	179	228	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG++ +++I + mg +t+ ++ s++qky+ XP_026448443.1 179 VDWTPELHRRFVQAVEQLGMDkaVPSRILEIMGiDCLTRHNIASHLQKYR 228 57******************************889**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MLALASLRNC SDERKGAENL EMEGSTFSIG VDDDFSTGNL LNDIDFDDLF VGMDYGDVLP 60 DLEIDPEILA EFSVSGSGEE SEFHNLSSSI SNDQEFSFFD DDNKQNIVKR SEEDEDSGSG 120 SAGSCLSSRG DEIVSKRDDS SSAKADNDNQ SQKDSSKCRK STSSSQSKGS SQGKRKVKVD 180 WTPELHRRFV QAVEQLGMDK AVPSRILEIM GIDCLTRHNI ASHLQKYRSH QKHLLAREAE 240 AASWSQRRQL YGGGCAASRG NTNNKIRSET HHPHHNPWIA PTMGFPPPTP PNLLHPYRPL 300 HVWGHPTVDP SSMHVWPKHL LHHAPSPPTP PTSHPRWPPP PPSLTPTSSP PDPSSFWHPN 360 HHQRLVSNNA LTAGTPCYPH QQQLGTTRAI SSAPLVPGIF PPAHATMYKV EHGIGGVPTP 420 PSSGFSSTSD SRTHPPLDLL HPTKDKVDAA IGDVLTKPWL PLPLGLKPPS LDSVLVELQR 480 QGIPEIPPTT AASTSTSTAS AGV

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MLALASLRNC SDERKGAENL EMEGSTFSIG VDDDFSTGNL LNDIDFDDLF VGMDYGDVLP  60
DLEIDPEILA EFSVSGSGEE SEFHNLSSSI SNDQEFSFFD DDNKQNIVKR SEEDEDSGSG  120
SAGSCLSSRG DEIVSKRDDS SSAKADNDNQ SQKDSSKCRK STSSSQSKGS SQGKRKVKVD  180
WTPELHRRFV QAVEQLGMDK AVPSRILEIM GIDCLTRHNI ASHLQKYRSH QKHLLAREAE  240
AASWSQRRQL YGGGCAASRG NTNNKIRSET HHPHHNPWIA PTMGFPPPTP PNLLHPYRPL  300
HVWGHPTVDP SSMHVWPKHL LHHAPSPPTP PTSHPRWPPP PPSLTPTSSP PDPSSFWHPN  360
HHQRLVSNNA LTAGTPCYPH QQQLGTTRAI SSAPLVPGIF PPAHATMYKV EHGIGGVPTP  420
PSSGFSSTSD SRTHPPLDLL HPTKDKVDAA IGDVLTKPWL PLPLGLKPPS LDSVLVELQR  480
QGIPEIPPTT AASTSTSTAS AGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	4e-61	G2-like family protein