PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026448440.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HB-other

Protein Properties

Length: 1832aa MW: 204237 Da PI: 5.0148

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026448440.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56	7e-18	31	87	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++kR t+ qle Le+ ++ + yps++ r+eL++kl+L++rq ++WF+ rR k++k XP_026448440.1 31 KSKRKMKTPMQLELLEKTYAVEAYPSEAIRQELSAKLDLSDRQLQMWFCHRRLKDRK 87 679****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1832 aa Download sequence
MMMDSTPDGE RKKPPEGTSG GGGGGGGGES KSKRKMKTPM QLELLEKTYA VEAYPSEAIR 60 QELSAKLDLS DRQLQMWFCH RRLKDRKVAP EKKPRKDNMQ LTASTSGQGL DEMMMGGGDQ 120 GNDPGSGSGS GSSQYEHRKV GGSGGRTTVS RGIADTTVAM SRRYHETPQD ISELRAIAFV 180 ESQLGEALRE DGPILGMEFD PLPPGAFGAP IVVQQKQAGR PYDGKMYDRH DTKSIKTPSV 240 LPGSSGGKRK LASGNAHMVH PQSAPRALQE YQFLPEQPSV RSDTYERADP SHFYSSQHDG 300 HSGRASSLSA GGSHLHGKEQ VPTGYGQGTS ASLQSQQGRH SHVLGEYDRM DVQVGLENPL 360 LSCDRRMSNE DEAARLERKR KFAQSDEARI AREVEAHEKR IRKELEKQDI LRRKREEQMR 420 REMEKHDRER RKEEERLMRE KLREEERFQR EQKRELERRE RFMQKENLRA EKMRQKEEQR 480 REKETARQKA ANERATARRI AKESMELIED ERLELMELAA SSKGLPSIIS LDSDTLENLD 540 LFKDMLVTFP PKSVQLSRPF AVQPWKDSEE NVGNLLMVWR FLITFADILE LWPFTLDEFV 600 QAFHDYDPRL LGEIHVALLR SIVKDIEDVA RTPSMGLGAN QNSSANPGGG HPQIVEGAYA 660 WGFDIRSWQQ HLNPLTWPEV LRQFALSAGF GPQLKKRSLE QSFFRDDNEG HDCEDIVSTL 720 RNGAAAVSAA AVMQEKGLSQ PRRSRHRLTP GTVKFAAFHV LSLEGSKGLS ILEVADKIQK 780 SGLRDLTTSK TPEASIAAAL SRDSHLFERT APSTYCVRAA FRKDPIDADA ILSAAREKIQ 840 IFANGLSDSE EAGKDVEDVD DDSECDVAED PEVDDIDMTS NQKEDHHLAS VITDKSVACL 900 KVGKRENAGK EVGEILQSGH GSAPGSSLKS FPLEGSQEIG TGALTDQSAD LARNSNGAST 960 NDLEDAEIDE SNTGEPWVQG LMEGEYADLT VEERLNALVA LIGVAIEGNS VRVILEERLE 1020 AANALKKQMW AEAQLDKRRM KEEYITKPQS LSFMGTKTEL NVMSSVVDGS QSPFGDSKNN 1080 EASLNPSLKE EPIFDPSNAQ IYLNNMSAEC NVTPENYQQQ HAYAAAEKSR SQYKSYIGQR 1140 AEEMYVYRSL PLGQDRKRNR YWQFVTSATR NDPGTGRIFY ESQGGCWRLI DTEEAFDILL 1200 SSLDIRGIRE SHLHSMLQKI EVSFKDAVRR NSKCRNHVDP VEDRVKTEVS EIVSSPDRSA 1260 GTESPSSTVC AVGSDTVLQS SSFKIDLGRN ETEKTDALKR YQDSQRWMWK ECFNPSTMCA 1320 IKYGKKRCSE LLVTCDFCLD SYFPKDNRCP VCHRIFGNLS NSSKSSDSVN QCEEKPRLES 1380 DWHIRGLETS LPLRIRLLKA QLAITEVSVS PEAIQPLWTE DSRNSWGLKL QSSSSAEDLL 1440 QILTLLEGAI KRDCLSSSFE TTKELLGNFA PTVRAADGFS SGSVPILPWV PQTTAAVALR 1500 LLELDASITY MLQQKAESQE DKESGDFIKL PSKYTVIKNI QEAEPAVTPE PAVFLQEENW 1560 FDMGSGRSTS GRGQMIRGKG RGRSAGGRLP RGSTGMRIDS GRLSAGKGEK MVAIQGLGKK 1620 SQTARGKGGR KRGKRTAKSR QKSSAAVKKR VVIKDMGLGG FSGQFGNSIV IPKQNNYRES 1680 PRSSGGEDEG GWEEDTRRLH DVHVQMDRDD ISVEEASGES DDNGLGEYDV RRTDYSGMYN 1740 GKSVDLLESD AEDEDEYVDD LRIGDEEDEE DLEEVEGDGY GEDDVDMEER YRVHGVGTNR 1800 NVQEIEEDDE DEDEENVDAD EAMETDSSDY SE

Sequence ? help Back to Top

Protein Sequence Length: 1832 aa Download sequence

MMMDSTPDGE RKKPPEGTSG GGGGGGGGES KSKRKMKTPM QLELLEKTYA VEAYPSEAIR  60
QELSAKLDLS DRQLQMWFCH RRLKDRKVAP EKKPRKDNMQ LTASTSGQGL DEMMMGGGDQ  120
GNDPGSGSGS GSSQYEHRKV GGSGGRTTVS RGIADTTVAM SRRYHETPQD ISELRAIAFV  180
ESQLGEALRE DGPILGMEFD PLPPGAFGAP IVVQQKQAGR PYDGKMYDRH DTKSIKTPSV  240
LPGSSGGKRK LASGNAHMVH PQSAPRALQE YQFLPEQPSV RSDTYERADP SHFYSSQHDG  300
HSGRASSLSA GGSHLHGKEQ VPTGYGQGTS ASLQSQQGRH SHVLGEYDRM DVQVGLENPL  360
LSCDRRMSNE DEAARLERKR KFAQSDEARI AREVEAHEKR IRKELEKQDI LRRKREEQMR  420
REMEKHDRER RKEEERLMRE KLREEERFQR EQKRELERRE RFMQKENLRA EKMRQKEEQR  480
REKETARQKA ANERATARRI AKESMELIED ERLELMELAA SSKGLPSIIS LDSDTLENLD  540
LFKDMLVTFP PKSVQLSRPF AVQPWKDSEE NVGNLLMVWR FLITFADILE LWPFTLDEFV  600
QAFHDYDPRL LGEIHVALLR SIVKDIEDVA RTPSMGLGAN QNSSANPGGG HPQIVEGAYA  660
WGFDIRSWQQ HLNPLTWPEV LRQFALSAGF GPQLKKRSLE QSFFRDDNEG HDCEDIVSTL  720
RNGAAAVSAA AVMQEKGLSQ PRRSRHRLTP GTVKFAAFHV LSLEGSKGLS ILEVADKIQK  780
SGLRDLTTSK TPEASIAAAL SRDSHLFERT APSTYCVRAA FRKDPIDADA ILSAAREKIQ  840
IFANGLSDSE EAGKDVEDVD DDSECDVAED PEVDDIDMTS NQKEDHHLAS VITDKSVACL  900
KVGKRENAGK EVGEILQSGH GSAPGSSLKS FPLEGSQEIG TGALTDQSAD LARNSNGAST  960
NDLEDAEIDE SNTGEPWVQG LMEGEYADLT VEERLNALVA LIGVAIEGNS VRVILEERLE  1020
AANALKKQMW AEAQLDKRRM KEEYITKPQS LSFMGTKTEL NVMSSVVDGS QSPFGDSKNN  1080
EASLNPSLKE EPIFDPSNAQ IYLNNMSAEC NVTPENYQQQ HAYAAAEKSR SQYKSYIGQR  1140
AEEMYVYRSL PLGQDRKRNR YWQFVTSATR NDPGTGRIFY ESQGGCWRLI DTEEAFDILL  1200
SSLDIRGIRE SHLHSMLQKI EVSFKDAVRR NSKCRNHVDP VEDRVKTEVS EIVSSPDRSA  1260
GTESPSSTVC AVGSDTVLQS SSFKIDLGRN ETEKTDALKR YQDSQRWMWK ECFNPSTMCA  1320
IKYGKKRCSE LLVTCDFCLD SYFPKDNRCP VCHRIFGNLS NSSKSSDSVN QCEEKPRLES  1380
DWHIRGLETS LPLRIRLLKA QLAITEVSVS PEAIQPLWTE DSRNSWGLKL QSSSSAEDLL  1440
QILTLLEGAI KRDCLSSSFE TTKELLGNFA PTVRAADGFS SGSVPILPWV PQTTAAVALR  1500
LLELDASITY MLQQKAESQE DKESGDFIKL PSKYTVIKNI QEAEPAVTPE PAVFLQEENW  1560
FDMGSGRSTS GRGQMIRGKG RGRSAGGRLP RGSTGMRIDS GRLSAGKGEK MVAIQGLGKK  1620
SQTARGKGGR KRGKRTAKSR QKSSAAVKKR VVIKDMGLGG FSGQFGNSIV IPKQNNYRES  1680
PRSSGGEDEG GWEEDTRRLH DVHVQMDRDD ISVEEASGES DDNGLGEYDV RRTDYSGMYN  1740
GKSVDLLESD AEDEDEYVDD LRIGDEEDEE DLEEVEGDGY GEDDVDMEER YRVHGVGTNR  1800
NVQEIEEDDE DEDEENVDAD EAMETDSSDY SE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	11	37	RKKPPEGTSGGGGGGGGGESKSKRKMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein