PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026448063.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 581aa    MW: 64743.4 Da    PI: 4.9091
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026448063.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS448.83.5e-1372115801373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+e+L++cA+avs++dl +a++l+  l++++s +g+p+qRl ay++e+L arl+++++++yk+l+++e +   s+e l+++++++e++P++kf++
  XP_026448063.1 211 LKEVLISCAKAVSDDDLPRANQLIGDLRNMVSVSGEPIQRLGAYMLEGLVARLSSTGHGIYKSLKCKEPA---SAELLSYMHILYEACPYFKFGY 302
                     5789*****************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN aI eav+ e+++HiiDf+i qG QW++L+qaLasRp+gpp++RiTg+++++s   +   l+ +g+rL+++A+++++pfef++ +  +  d
  XP_026448063.1 303 MSANGAIAEAVKDENHIHIIDFQIAQGSQWITLMQALASRPGGPPHIRITGIDDSNSAyaRGGGLQIVGQRLSRLADSCKIPFEFHA-APVSGVD 396
                     ******************************************************988899999************************.8889999 PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +e+++L+v+pgEa+aVn+ + lh+++desvs+e++rd++++l+kslsPkvv++veqe+++n++ Fl rfle+l+yy+a+f+s++a+l+r+++eri
  XP_026448063.1 397 IEFSSLEVRPGEAIAVNFPYVLHHMPDESVSTENHRDRLIRLIKSLSPKVVTLVEQESNTNTAAFLPRFLETLNYYTAMFESIDATLSRDHKERI 491
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     +vE+++l+r++vn++acegaer+erhe l+kW++r+++aGF+p+pls+ +++++k+ll  + ++ y++ e++g+l+lgW+dr Lv+ +aW
  XP_026448063.1 492 NVEQHCLARDVVNIIACEGAERVERHEVLGKWKSRFRMAGFTPYPLSSVVNSTIKTLLDSYCEK-YKLYEDDGALYLGWMDRDLVVSCAW 580
                     *************************************************************955.************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 581 aa     Download sequence    
MSSQLRSETS FSTKDYQCYS GSQVTGLSHL MGYSSLQAAS QKHGGFVGSQ NTYDQELQSN  60
YFPQSMRTLD ERRFTDETSH EMHYPAQTSS EQYCTLESSS ATGGYTVYNT PSTVSFSPNG  120
SPMSQQESHT YPQEPNHSPY DANGSPLSLS CITDNENDMW SKLKELETAM LGPDTDTMDS  180
PDSAFQGGLN SDQSAFDWNE MMEIMNPKRD LKEVLISCAK AVSDDDLPRA NQLIGDLRNM  240
VSVSGEPIQR LGAYMLEGLV ARLSSTGHGI YKSLKCKEPA SAELLSYMHI LYEACPYFKF  300
GYMSANGAIA EAVKDENHIH IIDFQIAQGS QWITLMQALA SRPGGPPHIR ITGIDDSNSA  360
YARGGGLQIV GQRLSRLADS CKIPFEFHAA PVSGVDIEFS SLEVRPGEAI AVNFPYVLHH  420
MPDESVSTEN HRDRLIRLIK SLSPKVVTLV EQESNTNTAA FLPRFLETLN YYTAMFESID  480
ATLSRDHKER INVEQHCLAR DVVNIIACEG AERVERHEVL GKWKSRFRMA GFTPYPLSSV  540
VNSTIKTLLD SYCEKYKLYE DDGALYLGWM DRDLVVSCAW I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein