PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026448061.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 594aa    MW: 66239.4 Da    PI: 5.1749
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026448061.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS448.73.8e-1372245931373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+e+L++cA+avs++dl +a++l+  l++++s +g+p+qRl ay++e+L arl+++++++yk+l+++e +   s+e l+++++++e++P++kf++
  XP_026448061.1 224 LKEVLISCAKAVSDDDLPRANQLIGDLRNMVSVSGEPIQRLGAYMLEGLVARLSSTGHGIYKSLKCKEPA---SAELLSYMHILYEACPYFKFGY 315
                     5789*****************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN aI eav+ e+++HiiDf+i qG QW++L+qaLasRp+gpp++RiTg+++++s   +   l+ +g+rL+++A+++++pfef++ +  +  d
  XP_026448061.1 316 MSANGAIAEAVKDENHIHIIDFQIAQGSQWITLMQALASRPGGPPHIRITGIDDSNSAyaRGGGLQIVGQRLSRLADSCKIPFEFHA-APVSGVD 409
                     ******************************************************988899999************************.8889999 PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +e+++L+v+pgEa+aVn+ + lh+++desvs+e++rd++++l+kslsPkvv++veqe+++n++ Fl rfle+l+yy+a+f+s++a+l+r+++eri
  XP_026448061.1 410 IEFSSLEVRPGEAIAVNFPYVLHHMPDESVSTENHRDRLIRLIKSLSPKVVTLVEQESNTNTAAFLPRFLETLNYYTAMFESIDATLSRDHKERI 504
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     +vE+++l+r++vn++acegaer+erhe l+kW++r+++aGF+p+pls+ +++++k+ll  + ++ y++ e++g+l+lgW+dr Lv+ +aW
  XP_026448061.1 505 NVEQHCLARDVVNIIACEGAERVERHEVLGKWKSRFRMAGFTPYPLSSVVNSTIKTLLDSYCEK-YKLYEDDGALYLGWMDRDLVVSCAW 593
                     *************************************************************955.************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 594 aa     Download sequence    
MRSGDITSLD ILSLKWTRFR GWNFSKLVSL KSTGSQVTGL SHLMGYSSLQ AASQKHGGFV  60
GSQNTYDQEL QSNYFPQSMR TLDERRFTDE TSHEMHYPAQ TSSEQYCTLE SSSATGGYTV  120
YNTPSTVSFS PNGSPMSQQE SHTYPQEPNH SPYDANGSPL SLSCITDNEN DMWSKLKELE  180
TAMLGPDTDT MDSPDSAFQG GLNSDQSAFD WNEMMEIMNP KRDLKEVLIS CAKAVSDDDL  240
PRANQLIGDL RNMVSVSGEP IQRLGAYMLE GLVARLSSTG HGIYKSLKCK EPASAELLSY  300
MHILYEACPY FKFGYMSANG AIAEAVKDEN HIHIIDFQIA QGSQWITLMQ ALASRPGGPP  360
HIRITGIDDS NSAYARGGGL QIVGQRLSRL ADSCKIPFEF HAAPVSGVDI EFSSLEVRPG  420
EAIAVNFPYV LHHMPDESVS TENHRDRLIR LIKSLSPKVV TLVEQESNTN TAAFLPRFLE  480
TLNYYTAMFE SIDATLSRDH KERINVEQHC LARDVVNIIA CEGAERVERH EVLGKWKSRF  540
RMAGFTPYPL SSVVNSTIKT LLDSYCEKYK LYEDDGALYL GWMDRDLVVS CAWI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein