PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026448021.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 769aa MW: 89183.9 Da PI: 6.1972

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026448021.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.5	6.9e-26	118	219	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtklel 83 +YneYA+ vGFs+r++k+++s+ +g + ++f+Cskeg+r++++++ + +rr+ + r+gC akl vk+ +dgkw+v k+++ XP_026448021.1 118 YYNEYARAVGFSIRRAKNRRSNIDGALIFQRFCCSKEGHRRKRRDNddeepkkmkdgvlVKVRRRNVRSIRVGCSAKLDVKRVTDGKWVVRKFDE 212 8***************************************99999*******9888999999*********************** PP FAR1 84 eHnHela 90 eHnHe+a XP_026448021.1 213 EHNHECA 219 **975 PP

Sequence ? help Back to Top
Protein Sequence Length: 769 aa Download sequence
MEQNTVQQIE EDEWDTDGFV IPSLSVGESD LSKPDGPEVK DDKVSSSKAT EEDEKIYLAS 60 QETQPSQVNQ PELILSSGYK QWIKQRLKEA EMDAPNDGTF YKPFVGMEFD SLDESYFYYN 120 EYARAVGFSI RRAKNRRSNI DGALIFQRFC CSKEGHRRKR RDNDDEEPKK MKDGVLVKVR 180 RRNVRSIRVG CSAKLDVKRV TDGKWVVRKF DEEHNHECAN SGEKHMLRSQ RRIQSIQVDM 240 SMSDCKIKKP EKGDVRALLN YFREMQTESP SFFYAIQGGK DDRMLNFFWA DTRSRMDYGY 300 FGDVVYFRSN YGINKYGRAF SPILGINHHL QTVLFGCAIL LNENEESLTW LLETFLKAMS 360 GRRPVAIVID GDAAMMKAIE QVLPGTRQSL CLGEILVDAS NHFSHLENMR DAFITDLKKC 420 IYDTQWCDEF ESSWVLLHEK YKLHENEWLD NLYKKRHMWA PVYSRHVFHA NMMTIQCIES 480 INSYFDGFVN EPLPLYEFLK QYDKALDHRR DEEISEDFQS LETRPVLKLD VPMEQQAADL 540 YTRSVFKEFH KEFCESFSYI AEETARVGTN WTYAVSRWGQ NRSCLVSFSS CNNDIRVNCD 600 CQNFEFTGIL CKHIFKVFTV RNIMLVPDVY IRKRWTKKAK VGVFLGEGCR KALEDCQKSQ 660 AFRFNDLCQL TFNLCAKSAI SINAYQTAKS TMEMIIGELD KEAEEEVSIT QPNIDHVSNL 720 HYPIDAVNGI GSSDHLMGED NQTLTSGNHV TMQNPQRVGD TRTGFWLRL

Sequence ? help Back to Top

Protein Sequence Length: 769 aa Download sequence

MEQNTVQQIE EDEWDTDGFV IPSLSVGESD LSKPDGPEVK DDKVSSSKAT EEDEKIYLAS  60
QETQPSQVNQ PELILSSGYK QWIKQRLKEA EMDAPNDGTF YKPFVGMEFD SLDESYFYYN  120
EYARAVGFSI RRAKNRRSNI DGALIFQRFC CSKEGHRRKR RDNDDEEPKK MKDGVLVKVR  180
RRNVRSIRVG CSAKLDVKRV TDGKWVVRKF DEEHNHECAN SGEKHMLRSQ RRIQSIQVDM  240
SMSDCKIKKP EKGDVRALLN YFREMQTESP SFFYAIQGGK DDRMLNFFWA DTRSRMDYGY  300
FGDVVYFRSN YGINKYGRAF SPILGINHHL QTVLFGCAIL LNENEESLTW LLETFLKAMS  360
GRRPVAIVID GDAAMMKAIE QVLPGTRQSL CLGEILVDAS NHFSHLENMR DAFITDLKKC  420
IYDTQWCDEF ESSWVLLHEK YKLHENEWLD NLYKKRHMWA PVYSRHVFHA NMMTIQCIES  480
INSYFDGFVN EPLPLYEFLK QYDKALDHRR DEEISEDFQS LETRPVLKLD VPMEQQAADL  540
YTRSVFKEFH KEFCESFSYI AEETARVGTN WTYAVSRWGQ NRSCLVSFSS CNNDIRVNCD  600
CQNFEFTGIL CKHIFKVFTV RNIMLVPDVY IRKRWTKKAK VGVFLGEGCR KALEDCQKSQ  660
AFRFNDLCQL TFNLCAKSAI SINAYQTAKS TMEMIIGELD KEAEEEVSIT QPNIDHVSNL  720
HYPIDAVNGI GSSDHLMGED NQTLTSGNHV TMQNPQRVGD TRTGFWLRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-139	FAR1 family protein