PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026447877.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 293aa MW: 33753.4 Da PI: 4.7682

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026447877.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.2	8e-13	18	65	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W +eEd +l+++++ +G g W+t++++ g+ R +k+c+ rw ++l XP_026447877.1 18 KGQWKPEEDMILKRYIETHGEGKWTTVSKKSGLMRGAKSCRMRWKNHL 65 799*******************************************97 PP
2	Myb_DNA-binding	50.6	4.6e-16	71	116	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++E++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l XP_026447877.1 71 RGQISEDEEDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 116 67889***************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MEKQKNIYKK GENGIIKKGQ WKPEEDMILK RYIETHGEGK WTTVSKKSGL MRGAKSCRMR 60 WKNHLRPNIK RGQISEDEED LIIRMHKLLG NRWSLIAGRL PGRTDNEVKN YWNTHLSRRN 120 LNQYQGQTVI PSAINCSKSR GLIQMEDPEK PLRGTTSTHE NCIMDGILDD QGRLDAEADV 180 QSDNTTTTTI ETQPSSSEQR SDDNNGSTIL SDQSLVSGES DDTEGSTFPD FPMVDYNMIS 240 EDENFSLWLS NETIFYDVPL LPSYDYYFPV SYEPFEHNSD DDYCGWDKNL SWL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	2e-58	MYB family protein