PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026447111.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 356aa MW: 40293.9 Da PI: 5.4008

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026447111.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.3	5.6e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEd++l d++++ G g+W++ ++ g++R++k+c++rw +yl XP_026447111.1 14 KGPWIPEEDQKLTDYIHKNGHGSWRALPKLAGLNRCGKSCRLRWSNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.1	7.4e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++l++ ++ lG++ W+ Ia +++ gRt++++k++w+++l XP_026447111.1 67 RGKFSDDEEQLIISLHSVLGNK-WSQIATHLP-GRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MGRSPSRDEI GLKKGPWIPE EDQKLTDYIH KNGHGSWRAL PKLAGLNRCG KSCRLRWSNY 60 LRPDIKRGKF SDDEEQLIIS LHSVLGNKWS QIATHLPGRT DNEIKNYWNT HLKKKLLQMG 120 IDPVTHRPRT DLNLLSNLPN LLAAANIFNL MNPWDNVSRL QADAQAQVAK VQLLNNLLQV 180 ISNGGSSSLQ PPNMELLNHL RSVPNRDNNY LINQYLEPNS QLLNTLGYSS NPSSQTPPPY 240 SICTLMHPNV PNDNENVATE DADCYRFEQG SSSRMDSNNY LNDSNMNVQD YLSSPEYIPA 300 LVSASPERNM NNIIKPEINT TTNSSTSTTF ETTAWGELNM DDEENILSDY WTDLLE

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MGRSPSRDEI GLKKGPWIPE EDQKLTDYIH KNGHGSWRAL PKLAGLNRCG KSCRLRWSNY  60
LRPDIKRGKF SDDEEQLIIS LHSVLGNKWS QIATHLPGRT DNEIKNYWNT HLKKKLLQMG  120
IDPVTHRPRT DLNLLSNLPN LLAAANIFNL MNPWDNVSRL QADAQAQVAK VQLLNNLLQV  180
ISNGGSSSLQ PPNMELLNHL RSVPNRDNNY LINQYLEPNS QLLNTLGYSS NPSSQTPPPY  240
SICTLMHPNV PNDNENVATE DADCYRFEQG SSSRMDSNNY LNDSNMNVQD YLSSPEYIPA  300
LVSASPERNM NNIIKPEINT TTNSSTSTTF ETTAWGELNM DDEENILSDY WTDLLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	1e-80	MYB family protein