PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026447055.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family NF-YA
Protein Properties Length: 322aa    MW: 35313.1 Da    PI: 8.4642
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026447055.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.21e-31167223158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep++VNaKQy++Il+RRq+Rakle+++kl +k rkpylheSRh hAl+R+RgsgGrF
  XP_026447055.1 167 NEPMFVNAKQYRAILRRRQSRAKLEAQNKL-IKDRKPYLHESRHLHALKRARGSGGRF 223
                     59****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MQELAKKGSD PIWWTSSGSQ IPQSCLSRSI SINMDSSPPD CRNVKQLGFQ LQDQDSSSTQ  60
STGQSHHEVS NMSGDHSNGQ CVSAQSDITY GKQGDAQNKS ILSLGTPEFV FPHQVDYAHS  120
VARLPYPYID PYYSGIVTSY GPQAIIHPQV MSVASARVPL PLELAENEPM FVNAKQYRAI  180
LRRRQSRAKL EAQNKLIKDR KPYLHESRHL HALKRARGSG GRFLNTKQLQ ELEKNNNSNG  240
QNTSDMGYLQ LGGNRSEIDF GDHGGASTTS CSDLTTSNSG AFFRQQDLRF PGYAHMGNGN  300
RQDGGGGGIM CNGSHQPVPV TQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.12e-50NF-YA family protein