PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026446775.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HSF

Protein Properties

Length: 368aa MW: 42448.3 Da PI: 4.6224

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026446775.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	101.8	6.2e-32	15	107	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k y++++d +++++isw ++nsf+++d+ f+k++LpkyFkhsnf+SF+RQLn+YgF+k++ ++ F +++F kgkk+ll++ XP_026446775.1 15 FLVKCYDMVDDTNTDSIISWCPSNNSFIIYDMIAFQKELLPKYFKHSNFSSFMRQLNTYGFRKLDPDR---------FIFGNEKFVKGKKQLLKD 100 9******************999**************************************99.........56************ PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i r+k++ XP_026446775.1 101 ISRRKKS 107 **987 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MGKSKGDKDG PLPPFLVKCY DMVDDTNTDS IISWCPSNNS FIIYDMIAFQ KELLPKYFKH 60 SNFSSFMRQL NTYGFRKLDP DRFIFGNEKF VKGKKQLLKD ISRRKKSQEH SIEKEPQQME 120 NKAPVVPPCI EVGMFGLQQE VEILKRDKNV LMQELVKCRQ QQQNADVELH CVRQRIKGME 180 LNQQQMLSLL VMAMQNPRFL SQLVQQKENN WRVADARKKR RLPAPVQSNE HVEPEVFEGQ 240 IVKYQPLTTE SQNSLPAPVL DTAEFEHTDP APIGDDDFFN NIDFTSFVEH LPLPDVPEDL 300 MEQLLSIASP RLQEIDEMEM YTTQNLEDEE GIKSDNLDAG VQAVENLELL TEQMGLLASD 360 EKYMSESP

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MGKSKGDKDG PLPPFLVKCY DMVDDTNTDS IISWCPSNNS FIIYDMIAFQ KELLPKYFKH  60
SNFSSFMRQL NTYGFRKLDP DRFIFGNEKF VKGKKQLLKD ISRRKKSQEH SIEKEPQQME  120
NKAPVVPPCI EVGMFGLQQE VEILKRDKNV LMQELVKCRQ QQQNADVELH CVRQRIKGME  180
LNQQQMLSLL VMAMQNPRFL SQLVQQKENN WRVADARKKR RLPAPVQSNE HVEPEVFEGQ  240
IVKYQPLTTE SQNSLPAPVL DTAEFEHTDP APIGDDDFFN NIDFTSFVEH LPLPDVPEDL  300
MEQLLSIASP RLQEIDEMEM YTTQNLEDEE GIKSDNLDAG VQAVENLELL TEQMGLLASD  360
EKYMSESP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17750.1	3e-86	HSF family protein