PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026446188.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 759aa MW: 86309.9 Da PI: 6.5927

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026446188.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.4	3.1e-20	59	152	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+++Ak++GFs+r+++++ + + +t+r+f+C + g+++ + +++ k +r+r+++r+gC a +++ k+ +w++t +++ HnHel XP_026446188.1 59 EFYCSFAKQCGFSIRRHRTRGKdGVGRGVTRRDFTCHRGGYPQMKPSDDGKLQRNRKSSRCGCLAYMRIVKRAdfdVPEWRITGFSNTHNHELL 152 6*************9998874556679***************9***************98887676789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 759 aa Download sequence
MSEGTSLLME TSENGTDMSP DDASTVEEIP ENTILSHQTS VNLVPFIGQR FVSQDAAYEF 60 YCSFAKQCGF SIRRHRTRGK DGVGRGVTRR DFTCHRGGYP QMKPSDDGKL QRNRKSSRCG 120 CLAYMRIVKR ADFDVPEWRI TGFSNTHNHE LLKSNEVGLL PAYCTISADD KSRICMFAKA 180 GMSVRQMLRL MELEKGLKLG CLPFTEIDVR NLLQSFRNVD RDNDAIDLLA MCKNIKDESP 240 DFKYDYKIDV HNRLEHIAWS YPSSLRSYEA FGDAVVFDTT HRLDAYDMSV GIWVGVDNHG 300 MNCFFGCVLL RDENMQSFSW ALKAFLGFMK GKAPQTILTD QNMWLKEAIA TELPATKHAF 360 CIWHIISKFS DWFSVLLGSH YDNWKAEFHR LYNLETVEDF EVGWREMVDA YQLHENKHVV 420 SLYALRSYWA LSYLRRCFFA GLTSTAQSDS INTFIQCFLN AQSQLTQFVH QVGVIAEFRD 480 HAGMKQKMQR KLRKVNLKTG SPIESHAANV LSPYAFSKLQ EELVLAPQYA SFQMEEGCFH 540 VRHHSQIDGG CKVIWVPTED HISCSCRQFE FSGIVCRHVL RVLSTNNCFN IPDQYLPNRW 600 RIFSLSSSMK SNLATSDMEH GEKVQTLQSM VSTLLAESVG TERLEVACQG LSMVLSSIKE 660 FPRSSSHDLT DVINDSPSDS LILPEVEDSD GIAQSFTAGN THESPIISEK LKERWQKDGH 720 DFCRKRRRSV SCYGQFELDA TDCPMMGGEG LNVDGLGFL

Sequence ? help Back to Top

Protein Sequence Length: 759 aa Download sequence

MSEGTSLLME TSENGTDMSP DDASTVEEIP ENTILSHQTS VNLVPFIGQR FVSQDAAYEF  60
YCSFAKQCGF SIRRHRTRGK DGVGRGVTRR DFTCHRGGYP QMKPSDDGKL QRNRKSSRCG  120
CLAYMRIVKR ADFDVPEWRI TGFSNTHNHE LLKSNEVGLL PAYCTISADD KSRICMFAKA  180
GMSVRQMLRL MELEKGLKLG CLPFTEIDVR NLLQSFRNVD RDNDAIDLLA MCKNIKDESP  240
DFKYDYKIDV HNRLEHIAWS YPSSLRSYEA FGDAVVFDTT HRLDAYDMSV GIWVGVDNHG  300
MNCFFGCVLL RDENMQSFSW ALKAFLGFMK GKAPQTILTD QNMWLKEAIA TELPATKHAF  360
CIWHIISKFS DWFSVLLGSH YDNWKAEFHR LYNLETVEDF EVGWREMVDA YQLHENKHVV  420
SLYALRSYWA LSYLRRCFFA GLTSTAQSDS INTFIQCFLN AQSQLTQFVH QVGVIAEFRD  480
HAGMKQKMQR KLRKVNLKTG SPIESHAANV LSPYAFSKLQ EELVLAPQYA SFQMEEGCFH  540
VRHHSQIDGG CKVIWVPTED HISCSCRQFE FSGIVCRHVL RVLSTNNCFN IPDQYLPNRW  600
RIFSLSSSMK SNLATSDMEH GEKVQTLQSM VSTLLAESVG TERLEVACQG LSMVLSSIKE  660
FPRSSSHDLT DVINDSPSDS LILPEVEDSD GIAQSFTAGN THESPIISEK LKERWQKDGH  720
DFCRKRRRSV SCYGQFELDA TDCPMMGGEG LNVDGLGFL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	724	728	RKRRR
2	724	729	RKRRRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein