PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026444601.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 919aa MW: 100561 Da PI: 8.8766

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026444601.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42	2.1e-13	40	85	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g WT+eEd+ l + v+ + g++Wkt+a+ + +Rt+ qc +rwqk+l XP_026444601.1 40 GGWTAEEDDYLRKWVEFYKGKHWKTVASGLH-NRTDVQCLHRWQKVL 85 66***************************.**********986 PP
2	Myb_DNA-binding	47.3	4.9e-15	91	137	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++v + + W+ +a+ ++ gR +kqc++rw+++l XP_026444601.1 91 KGPWSQEEDRKLIELVSKSEPIKWSVVAKSIP-GRIGKQCRERWHNHL 137 79****************99******.***********97 PP
3	Myb_DNA-binding	40.1	8.3e-13	143	185	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+++++ +v+a++ +G+ W+ Ia+ ++ gRt++ +k+ w+ XP_026444601.1 143 KDAWTKDDELAIVRAHRVYGNQ-WAEIAKLLP-GRTENAIKNLWN 185 679***************99.*****.*******997 PP

Sequence ? help Back to Top
Protein Sequence Length: 919 aa Download sequence
MAEAKIDVPY CSENKESTVS EEEAKRISKT IRGPVRHREG GWTAEEDDYL RKWVEFYKGK 60 HWKTVASGLH NRTDVQCLHR WQKVLNPEVN KGPWSQEEDR KLIELVSKSE PIKWSVVAKS 120 IPGRIGKQCR ERWHNHLDPN IKKDAWTKDD ELAIVRAHRV YGNQWAEIAK LLPGRTENAI 180 KNLWNCSLKK KLDVYLSAEL LPPVLKTGED NARNIPTSSP KLRYPSIYRE DYLWNTDLQK 240 NLGICLSTGK LPSFGSVLKT GEYDAKNATK SSVGNSAVCS NKGLNAIAGS CLGNENSTKN 300 LWITPLLKNL DIHQSTERLL SSGSVLKTGE ANPKSATKST AVGNSTMSDK KGLSAGTRSC 360 LENENSIVNI RNCSLKTMLE FHRSTGLLPA VGSVLKTRRD DEKRVTKSPV VGNSAVCNDE 420 IFNASTRSCL ENRHTGKNPR NSSLEENIDF HLYTGELPPV GTVLNTEDYA LQISISPAAE 480 KISGCNNERF NDGTQCSLGN EDFYKVNKGC MDPVEPSIPE FLDAGDPTGV LATQSSNSVG 540 LGCRQLASEH EFSRSNSKEN LFKHRSIAGK PLPISVPVTG SLNLITSILT SEMGKTGVLA 600 TNSNNSVSLG CRQLASEHEF SRKSSKANLV KDRSIGDIER SIAGTLLSFS VPVTGSLNQK 660 TSDLTSEIGK TCVLATDSSN SDDLGCRQLA SKHGFSRSNS KENLIKYRSI GDIERSIAGT 720 LLSISVPVTG SLNQETPGLT SEIGKSGVLA TDSSNSVGLG CRQLASKHEF SRSNSKANLA 780 KYRSIGDIER RIAGTPLPIS VPVTKFQNRS ATPVKESKPS KKSALSEAIR SQWELQKSLH 840 DQLEFQREPQ LRAVETARQP QKLFEEQKKV GEALMLASQP SCSTNHAVSA GTSSTRLGQD 900 LLNDGSSDVS LRNDLHEAC

Sequence ? help Back to Top

Protein Sequence Length: 919 aa Download sequence

MAEAKIDVPY CSENKESTVS EEEAKRISKT IRGPVRHREG GWTAEEDDYL RKWVEFYKGK  60
HWKTVASGLH NRTDVQCLHR WQKVLNPEVN KGPWSQEEDR KLIELVSKSE PIKWSVVAKS  120
IPGRIGKQCR ERWHNHLDPN IKKDAWTKDD ELAIVRAHRV YGNQWAEIAK LLPGRTENAI  180
KNLWNCSLKK KLDVYLSAEL LPPVLKTGED NARNIPTSSP KLRYPSIYRE DYLWNTDLQK  240
NLGICLSTGK LPSFGSVLKT GEYDAKNATK SSVGNSAVCS NKGLNAIAGS CLGNENSTKN  300
LWITPLLKNL DIHQSTERLL SSGSVLKTGE ANPKSATKST AVGNSTMSDK KGLSAGTRSC  360
LENENSIVNI RNCSLKTMLE FHRSTGLLPA VGSVLKTRRD DEKRVTKSPV VGNSAVCNDE  420
IFNASTRSCL ENRHTGKNPR NSSLEENIDF HLYTGELPPV GTVLNTEDYA LQISISPAAE  480
KISGCNNERF NDGTQCSLGN EDFYKVNKGC MDPVEPSIPE FLDAGDPTGV LATQSSNSVG  540
LGCRQLASEH EFSRSNSKEN LFKHRSIAGK PLPISVPVTG SLNLITSILT SEMGKTGVLA  600
TNSNNSVSLG CRQLASEHEF SRKSSKANLV KDRSIGDIER SIAGTLLSFS VPVTGSLNQK  660
TSDLTSEIGK TCVLATDSSN SDDLGCRQLA SKHGFSRSNS KENLIKYRSI GDIERSIAGT  720
LLSISVPVTG SLNQETPGLT SEIGKSGVLA TDSSNSVGLG CRQLASKHEF SRSNSKANLA  780
KYRSIGDIER RIAGTPLPIS VPVTKFQNRS ATPVKESKPS KKSALSEAIR SQWELQKSLH  840
DQLEFQREPQ LRAVETARQP QKLFEEQKKV GEALMLASQP SCSTNHAVSA GTSSTRLGQD  900
LLNDGSSDVS LRNDLHEAC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	2e-81	MYB family protein