PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026444294.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 445aa MW: 49105.4 Da PI: 7.3059

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026444294.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.5	7.4e-19	56	101	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g W++eEdell ++v++lG ++W++I++ ++ gR++k+c++rw + XP_026444294.1 56 KGTWSPEEDELLTQLVAKLGARNWNLISAGIP-GRSGKSCRLRWCNQ 101 799***************************.*********985 PP
2	Myb_DNA-binding	58.8	1.2e-18	108	152	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T+ Edel++da++ +G++ W++Iar ++ gRt++ +k++w++ XP_026444294.1 108 RKPFTEKEDELIIDAHAVHGNR-WAAIARLLP-GRTDNAIKNHWNST 152 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MKEDEKLRLQ RGGGGGHDSG GGGGETLEVK DETNHNNNGI IRTRSTSSVV RKSRVKGTWS 60 PEEDELLTQL VAKLGARNWN LISAGIPGRS GKSCRLRWCN QLDPYLKRKP FTEKEDELII 120 DAHAVHGNRW AAIARLLPGR TDNAIKNHWN STLRRRCLEF DPPKGTKAAA VLAASIEMMG 180 GNPMNLDKTK VLSETTLSCE PDVNREAHVN MGDNAVNLDK TKVLSETTLS CEPDVNRQPD 240 VNMGDNAMNL DKTKVLSETT EPDMNCEPVA KGKDVVNSLE NQSNQHQDRE ENYRVEYRCR 300 NEPKEKPRLF LPTPRVSAFN LYNQDQSMGG YVLPTMVPML HGPLLQPCKP PVVGQCGMLG 360 GIRRVPSHCG HGCCTGSRSV GEDGRSSLLG PEFVEFVEPP PFSGHELVSI ATELSNVAWI 420 KSGLGFGFNH RGIVKDNAEQ QVIYH

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MKEDEKLRLQ RGGGGGHDSG GGGGETLEVK DETNHNNNGI IRTRSTSSVV RKSRVKGTWS  60
PEEDELLTQL VAKLGARNWN LISAGIPGRS GKSCRLRWCN QLDPYLKRKP FTEKEDELII  120
DAHAVHGNRW AAIARLLPGR TDNAIKNHWN STLRRRCLEF DPPKGTKAAA VLAASIEMMG  180
GNPMNLDKTK VLSETTLSCE PDVNREAHVN MGDNAVNLDK TKVLSETTLS CEPDVNRQPD  240
VNMGDNAMNL DKTKVLSETT EPDMNCEPVA KGKDVVNSLE NQSNQHQDRE ENYRVEYRCR  300
NEPKEKPRLF LPTPRVSAFN LYNQDQSMGG YVLPTMVPML HGPLLQPCKP PVVGQCGMLG  360
GIRRVPSHCG HGCCTGSRSV GEDGRSSLLG PEFVEFVEPP PFSGHELVSI ATELSNVAWI  420
KSGLGFGFNH RGIVKDNAEQ QVIYH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09230.1	8e-59	MYB family protein