PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026443635.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 262aa    MW: 28461 Da    PI: 5.1619
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026443635.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF343.7e-111052244
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44
                     i nk nr+ t+s R++++ K  +E S LC++++++i++ +++
  XP_026443635.1 10 YIANKKNRKKTYSERLKTLKKSIYEFSELCGVDACMIVYDPDQ 52
                    599****************999*****************8875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MGRAKLKMEY IANKKNRKKT YSERLKTLKK SIYEFSELCG VDACMIVYDP DQGKPEICPR  60
NMNEVQRITK RYIQIPKEKR DKLILDDKKK EKTREYDEMP MSRQVNGFSI KQLEQLHSKL  120
GSKIETLSEK IQSMDGGGAG MSNEAPQKEY PCYNPERASD HEPTVVGAVA KKDAGAAQDV  180
ETIVGEAEAT VEGVIEAAIG EGAGANVGSI GETAEASFGD SAGTGFGDVI GTCFKDGVKS  240
AAETASREDA NASVEMTSGR DA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05860.26e-15M-type_MADS family protein