PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026443629.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 424aa MW: 47389.8 Da PI: 7.1425

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026443629.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.2	7.9e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +++ +v ++G+g+W++++++ g++R++k+c++rw +yl XP_026443629.1 14 RGLWTAEEDAKILAYVSRHGTGNWTAVPKKAGLKRCGKSCRLRWTNYL 61 788*******************************************97 PP
2	Myb_DNA-binding	46.9	6.4e-15	69	110	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +T++E+el++++++ G++ W++Ia+ ++ gRt++++k++w++ XP_026443629.1 69 TFTPQEEELIIRLHATIGSR-WSLIANQLP-GRTDNDVKNFWNT 110 79****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MGRPPCCDKT NVKRGLWTAE EDAKILAYVS RHGTGNWTAV PKKAGLKRCG KSCRLRWTNY 60 LRPDLKHDTF TPQEEELIIR LHATIGSRWS LIANQLPGRT DNDVKNFWNT KLRKKLQEMG 120 IDPVTHKPIS QIIIDYGNIS GLPNKTTRFG SLNRDLRNAF MSTKPEPVSS SVTQDHSISN 180 MTTNTSTGVD IKTPKMEPKP EMSFNNSSSS SWDLLPQIHA MQLVTEASNN CNKNKEIVQP 240 NYFHEGSSSS SSASSSNIIN NQAGSSSPPP SYLLNPQSSL VPTTEPSSPL FSWSEFLHED 300 AFLPSDQQQQ PQQQQQKQDL QWMSYSNGSS SIQAQHEMPK MENFKNVDEQ RTFRGVREMG 360 NGNFNYMGQQ ASHHPVVTGM AGDTATGIGP SSASNNSFVK GILDQEIHDS EMLWEFPSLF 420 DDSY

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MGRPPCCDKT NVKRGLWTAE EDAKILAYVS RHGTGNWTAV PKKAGLKRCG KSCRLRWTNY  60
LRPDLKHDTF TPQEEELIIR LHATIGSRWS LIANQLPGRT DNDVKNFWNT KLRKKLQEMG  120
IDPVTHKPIS QIIIDYGNIS GLPNKTTRFG SLNRDLRNAF MSTKPEPVSS SVTQDHSISN  180
MTTNTSTGVD IKTPKMEPKP EMSFNNSSSS SWDLLPQIHA MQLVTEASNN CNKNKEIVQP  240
NYFHEGSSSS SSASSSNIIN NQAGSSSPPP SYLLNPQSSL VPTTEPSSPL FSWSEFLHED  300
AFLPSDQQQQ PQQQQQKQDL QWMSYSNGSS SIQAQHEMPK MENFKNVDEQ RTFRGVREMG  360
NGNFNYMGQQ ASHHPVVTGM AGDTATGIGP SSASNNSFVK GILDQEIHDS EMLWEFPSLF  420
DDSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28470.1	3e-77	MYB family protein