PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026442969.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 370aa MW: 42100.7 Da PI: 5.9964

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026442969.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.6	6.8e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv++++++G g+W+t ++ g+ R++k+c++rw +yl XP_026442969.1 14 KGPWTAEEDQKLVEYIQKHGHGSWRTLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.5	5.7e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ XP_026442969.1 67 RGRFSFEEEETIIQLHSVLGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MGRTPCCDKN GLKKGPWTAE EDQKLVEYIQ KHGHGSWRTL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSVLGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHSPRL DLLDLSSILN SSLYNNSSRL NISRLLGLDQ PLSNHPDLLR LAATLFSSQR 180 DDQNSNLVLP NLQEYQYSNS HIQEQNQNQF QNLHQLENCT TSTTTTTTPF SNIETQLLHA 240 NVEQFQANPT NFPSQQPLEW EENVQTMHGA NMIDSLVSLP DYSFYSGSDQ SSIIDPLSYN 300 SNFNSVSSST DQSFNFTSVL STPSSSPPPL NSYSSTYVTS STEDERESYC SNINVMKFEI 360 PDIFGVNEFM

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MGRTPCCDKN GLKKGPWTAE EDQKLVEYIQ KHGHGSWRTL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSVLGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHSPRL DLLDLSSILN SSLYNNSSRL NISRLLGLDQ PLSNHPDLLR LAATLFSSQR  180
DDQNSNLVLP NLQEYQYSNS HIQEQNQNQF QNLHQLENCT TSTTTTTTPF SNIETQLLHA  240
NVEQFQANPT NFPSQQPLEW EENVQTMHGA NMIDSLVSLP DYSFYSGSDQ SSIIDPLSYN  300
SNFNSVSSST DQSFNFTSVL STPSSSPPPL NSYSSTYVTS STEDERESYC SNINVMKFEI  360
PDIFGVNEFM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-92	MYB family protein