PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026441698.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HB-other

Protein Properties

Length: 388aa MW: 44258.2 Da PI: 4.228

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026441698.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	25.4	4.5e-08	37	82	1	47
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 +fY++Y k++GF v+k++++k +ng + tf+C+k + e +++ XP_026441698.1 37 NFYKDYNKRLGFGVKKRSNRKD-DNGVLRRTTFTCTKGNFYEAKNHP 82 6*************999987.9999********9988877655 PP
2	Homeobox	28.5	2.5e-09	319	366	6	53
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 +++k q+e+Le+++ +++ p+ + + + + ++L++++V WF +Ra XP_026441698.1 319 RLKKVQTETLERVYLRSKRPTNALISSIVHVTNLPKKRVVKWFEDKRA 366 57899******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MEEAKVMDDN IEGREDDVNH GAPVVGMTFG DREELFNFYK DYNKRLGFGV KKRSNRKDDN 60 GVLRRTTFTC TKGNFYEAKN HPYLCDSPHL MDQKQSLTKK SEVEVVDDIN EDAIEALFNQ 120 LEEDLKSDAS FADGDDDLTE EDLARLEKEL KEAFGEDADL FEMLQLSEEN IQNSDDAEDG 180 EEDEEDEEEE EIDDDDEEEE ESPVQLKNWQ LRRLATALKI GRRKISIQTL AAELCLDRDV 240 VLELLREPPP NLFMLSAALP DIVGPKPIEI EGKPIEVSTE TIVDVPEPSV EASDGVLEPD 300 PKVKVPVHAM ESRWSAQKRL KKVQTETLER VYLRSKRPTN ALISSIVHVT NLPKKRVVKW 360 FEDKRAEDGI AEDRLPYQRS KSETVSTS

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MEEAKVMDDN IEGREDDVNH GAPVVGMTFG DREELFNFYK DYNKRLGFGV KKRSNRKDDN  60
GVLRRTTFTC TKGNFYEAKN HPYLCDSPHL MDQKQSLTKK SEVEVVDDIN EDAIEALFNQ  120
LEEDLKSDAS FADGDDDLTE EDLARLEKEL KEAFGEDADL FEMLQLSEEN IQNSDDAEDG  180
EEDEEDEEEE EIDDDDEEEE ESPVQLKNWQ LRRLATALKI GRRKISIQTL AAELCLDRDV  240
VLELLREPPP NLFMLSAALP DIVGPKPIEI EGKPIEVSTE TIVDVPEPSV EASDGVLEPD  300
PKVKVPVHAM ESRWSAQKRL KKVQTETLER VYLRSKRPTN ALISSIVHVT NLPKKRVVKW  360
FEDKRAEDGI AEDRLPYQRS KSETVSTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11270.1	3e-65	HB-other family protein