PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026441358.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 359aa MW: 40430 Da PI: 6.7914

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026441358.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.3	2e-19	27	74	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l+++++++G g+W++ ++ g++R++k+c++rw +yl XP_026441358.1 27 KGPWTPEEDEKLIQYIHKHGHGSWRALPKLAGLHRCGKSCRLRWTNYL 74 79********************************************97 PP
2	Myb_DNA-binding	53.1	7.3e-17	80	125	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ +++++ lG++ W++Ia +++ gRt++++k++w+++l XP_026441358.1 80 RGKFSKEEEQTILHLHSFLGNK-WSAIATHLP-GRTDNEIKNFWNTHL 125 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MRIRPSSSSS YQQDDDNNNN NGFSIKKGPW TPEEDEKLIQ YIHKHGHGSW RALPKLAGLH 60 RCGKSCRLRW TNYLRPDIKR GKFSKEEEQT ILHLHSFLGN KWSAIATHLP GRTDNEIKNF 120 WNTHLKKKLI QMGFDPMTHR PRTDLFSSLP QLLALANLSD ILMKTNTIQQ QPWDNQEQVV 180 MKLQTELATA SQLAKLQYLQ NCLLGPSNNS NSLLNPNSCN STSTDVEALS NLLNSFKENP 240 LPSQIPNNSA FPSTTIHKFS HLPDLVQEQK PNCSFQASFS SIDDGQGSDF SMFNQGDQSV 300 PTTTTPTSPW INIAETSSTY VSNHGDSSSS ISTMDNGVNV TKLDSFWPDF FADEDPFLQ

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MRIRPSSSSS YQQDDDNNNN NGFSIKKGPW TPEEDEKLIQ YIHKHGHGSW RALPKLAGLH  60
RCGKSCRLRW TNYLRPDIKR GKFSKEEEQT ILHLHSFLGN KWSAIATHLP GRTDNEIKNF  120
WNTHLKKKLI QMGFDPMTHR PRTDLFSSLP QLLALANLSD ILMKTNTIQQ QPWDNQEQVV  180
MKLQTELATA SQLAKLQYLQ NCLLGPSNNS NSLLNPNSCN STSTDVEALS NLLNSFKENP  240
LPSQIPNNSA FPSTTIHKFS HLPDLVQEQK PNCSFQASFS SIDDGQGSDF SMFNQGDQSV  300
PTTTTPTSPW INIAETSSTY VSNHGDSSSS ISTMDNGVNV TKLDSFWPDF FADEDPFLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	2e-92	MYB family protein