PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026441350.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 269aa MW: 31140.2 Da PI: 10.0759

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026441350.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.9	1.3e-14	21	68	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W ++Ed+ll ++++++G g W ++ + g++R++k+c++rw+++l XP_026441350.1 21 KGPWAEDEDLLLRKCIEKHGAGKWGQVPLRAGLNRCRKSCRLRWLNHL 68 79********************************************97 PP
2	Myb_DNA-binding	40.8	5.1e-13	74	119	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + ++E +l+++ +k+lG++ W++Ia +++ gRt++++k++++++l XP_026441350.1 74 RGEFEADEVDLIARMHKLLGNR-WSLIAGRVP-GRTANDIKNFFNTHL 119 79999***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MHHPSMENTS SIPSSLKGLR KGPWAEDEDL LLRKCIEKHG AGKWGQVPLR AGLNRCRKSC 60 RLRWLNHLQP DLKRGEFEAD EVDLIARMHK LLGNRWSLIA GRVPGRTAND IKNFFNTHLK 120 KKCFSKHGQK NKQKKRRRPS RRNIDDNHMT VMTKVLRPQP RSFSETSQWI INKESAPIAA 180 GMINNLKATT NSNDHEDHEL AKNSLLSVVN HLDGFSSKNV NSSDAYYCNF HNDRRLKEVD 240 DYLNNDGWYL DDDLWRMLGE NQDGQYLTI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	120	138	KKKCFSKHGQKNKQKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	1e-60	MYB family protein