PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026440603.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | RAV | ||||||||
Protein Properties | Length: 353aa MW: 40635.4 Da PI: 6.9532 | ||||||||
Description | RAV family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 31.5 | 4.3e-10 | 49 | 90 | 2 | 49 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49 ++kGV + +grW A+I++ + r+++g+f ++ eAa a++ a XP_026440603.1 49 RFKGVVSQP-NGRWGAQIYVK-----KERIWIGTFKSESEAAMAYDSA 90 689**8888.8*********4.....6**********88*******88 PP | |||||||
2 | B3 | 87.6 | 1.1e-27 | 172 | 271 | 1 | 91 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---.......--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkke.....esktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 f+k+ltpsdv+k++rlv+pk+fae++ + + +++l++ d++ + W+++++y+++s++yv+t+GW++Fvk+ +L+++D+v+F+ XP_026440603.1 172 FQKELTPSDVGKLNRLVIPKRFAEKYfpevskeE---KhpgviDDIQLSFFDREMKCWKFRYCYWRSSQSYVFTRGWNRFVKDRKLEAKDMVTFY 263 99**************************876541...1356667889************************************************ PP E-SSSEE. CS B3 84 ldgrsefe 91 +++++e XP_026440603.1 264 KCRKEQKE 271 54445554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 353 aa Download sequence |
MEEEMLSRVS DNTTLHGVEE GCLDSNSSNS PRGSNKRHRQ DMSATPSARF KGVVSQPNGR 60 WGAQIYVKKE RIWIGTFKSE SEAAMAYDSA TVHLRSQDSP RNYPLTPQTS LEPDFQNLFE 120 RHEILSMLRD GLYQTKFNEF VNSRSLNHDK QHDGLSLSLS TNDAAVTYQQ LFQKELTPSD 180 VGKLNRLVIP KRFAEKYFPE VSKEEKHPGV IDDIQLSFFD REMKCWKFRY CYWRSSQSYV 240 FTRGWNRFVK DRKLEAKDMV TFYKCRKEQK EYYMIDVALN GAEINGGSVG THATGNREDL 300 QLGFGQISIN ESGPSDRTSS TRMQNLEDME VAPPQRDEEE EKKAVRLFGV NIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50680.1 | 3e-83 | RAV family protein |