PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026439963.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 602aa    MW: 69080 Da    PI: 7.9729
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026439963.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.75.7e-1521106899
                     -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     ++  + +rl lpkk ++ +g  +e +k   +ed++g+ W v++  rk  g++++++GW+eF +   + +g f++F+++g+s f  +v++++k
  XP_026439963.1  21 NYIIQDRRLELPKKIVRIFG--EELGKAGLIEDPTGKIWPVEI--RKAEGEIYFQSGWQEFREYFSISVGHFLIFRYVGDSHF--HVSICDK 106
                     56677889********6666..347788999************..**********************************9999..*****98 PP
2B360.23.5e-19333429599
                     -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.....EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.....yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                      ++s+  k++++ +p +f +++ + k++  ++tl+d++g++W+v++ y +++gr       l kGW eFv +n+Lk+ D +vF+l+++++ e++v
  XP_026439963.1 333 IKQSHLQKHSLVHVPYEFSRDF-LTKAG--EVTLKDSTGKKWRVEYYYYRSGGRsscfkANLCKGWYEFVLDNHLKVDDACVFELVDTDNLEMKV 424
                     578999999999******9888.44445..7***************88555555554455566***********************99******* PP

                     EEE-S CS
              B3  95 kvfrk 99 
                      +fr 
  XP_026439963.1 425 NIFRV 429
                     ***96 PP
3B361.91e-19503597499
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     +++ps+ lk   + +p +fa+++   ++++  +tl+d++g++W v+++   +  + +l+kGW  Fv +n+Lk++D ++F+ld+ ++ e++v +fr
  XP_026439963.1 503 IMKPSYLLKGYTVHVPFQFARDFLT-NRGDDSVTLKDSTGKKWHVRYKTYSSEMKAILSKGWYVFVLDNHLKVNDACIFELDDIDNLEMKVNIFR 596
                     68999***************99933.345668***************76666666*************************9877**********9 PP

                     S CS
              B3  99 k 99 
                     +
  XP_026439963.1 597 A 597
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 602 aa     Download sequence    
MEKKKKKKKK MGSHFFKIIC NYIIQDRRLE LPKKIVRIFG EELGKAGLIE DPTGKIWPVE  60
IRKAEGEIYF QSGWQEFREY FSISVGHFLI FRYVGDSHFH VSICDKTACE IEYPCQPKNV  120
HESKHRSMEN DQNTAANQAG PSFVASKRNR YEDYQKAGGS VKRNKSDGFE EYTGKRWASF  180
KRHLEVVTIS SDGESDDEDY QNPGDSAEQN ESEEIETISC RPCAKRHLEM VTISSDGESN  240
DEDYQNHVDS EPRAVNFEGD PEVVTINSES SDKRPMDTQH RSASHKGKYK IAKMVSYAEH  300
KADVSECRSG KAMSAIGKAR AFKSEFPTCT IVIKQSHLQK HSLVHVPYEF SRDFLTKAGE  360
VTLKDSTGKK WRVEYYYYRS GGRSSCFKAN LCKGWYEFVL DNHLKVDDAC VFELVDTDNL  420
EMKVNIFRVS PDMAFNTLKP DSESDDEHTM PTQTKSAIRG GNRKISKTGE VKVWKNKCQR  480
AMGDPVNKEA TAFKSEFPTC RIIMKPSYLL KGYTVHVPFQ FARDFLTNRG DDSVTLKDST  540
GKKWHVRYKT YSSEMKAILS KGWYVFVLDN HLKVNDACIF ELDDIDNLEM KVNIFRASPD  600
MV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
139KKKKKKK
2410KKKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.18e-22B3 family protein