PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026439408.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 196aa    MW: 21122.9 Da    PI: 6.8971
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026439408.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260140.17.1e-4410108199
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrrkC ++C+++pyfp e+p+kfanvhk+FGasnv+kll++l +++reda++sl+yeAear++dPvyG+vg i+ lq+++++l++el+
  XP_026439408.1  10 PCAACKFLRRKCMPGCIFSPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVKDPVYGCVGAISFLQREVHRLQKELD 104
                     7*********************************************************************************************9 PP

          DUF260  96 llke 99 
                     ++++
  XP_026439408.1 105 AANA 108
                     9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MATSSSSNSP CAACKFLRRK CMPGCIFSPY FPPEEPQKFA NVHKIFGASN VTKLLNELLP  60
HQREDAVNSL AYEAEARVKD PVYGCVGAIS FLQREVHRLQ KELDAANADL IRYACNEIPT  120
TLNTTLQSGT SNIPPMVTNP QQRPINVRME TDGGSFYQNT SGLLLPFPPL WLDGPSGNIH  180
ERGGGGGGVG GGGADM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63090.25e-76LBD family protein