PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026438414.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 180aa MW: 20909.1 Da PI: 11.097

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026438414.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.6	1.9e-15	12	59	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd+ll ++++++G g W++++ + g+ R++k+c +rw++yl XP_026438414.1 12 KGAWSAEEDLLLRKCIQKYGEGKWHRVPLRAGLDRCRKSCGLRWLNYL 59 79********************************************97 PP
2	Myb_DNA-binding	44.5	3.6e-14	65	110	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + ++E +l+v+ +k+lG++ W++Ia +++ gRt++++k++++++l XP_026438414.1 65 RGEFKADEVDLIVRMHKLLGNR-WSLIAGRIP-GRTANDVKNFYNTHL 110 79999***************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence
MEGSSSTRGL RKGAWSAEED LLLRKCIQKY GEGKWHRVPL RAGLDRCRKS CGLRWLNYLR 60 PNIKRGEFKA DEVDLIVRMH KLLGNRWSLI AGRIPGRTAN DVKNFYNTHL KMIYFSKHIS 120 NRHCDSHRGE AVPKSRRQRL NIGPPDDKSH TTMVVNVVRH VPRNFSDRYK STIQKSSSEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	2e-62	MYB family protein