PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026437598.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB
Protein Properties Length: 271aa    MW: 30948.3 Da    PI: 9.9441
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026437598.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.31.1e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+ Ed++l d++k++G g W+  + + g++R++k+c++rw++yl
   XP_026437598.1 14 RGAWTATEDKILSDYIKKYGEGGWRNLPTKAGLKRCGKSCRLRWLNYL 61
                     89********************************************97 PP

2Myb_DNA-binding51.81.8e-1667111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+ + +E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ 
   XP_026437598.1  67 RGNISSDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111
                      78999*****************.*********.***********986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MGRSPCCSKE GLNRGAWTAT EDKILSDYIK KYGEGGWRNL PTKAGLKRCG KSCRLRWLNY  60
LRPDIKRGNI SSDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLAKKIQNHS  120
ASSSTRKSPI KSKEKKKTSV ETRTSKPKIK SSTVVKTKAL RCTKLFFSPT PQTQTVENRD  180
KIRGSTEHYT EMKLETVNGF LGCPLRGKNL LQNYEMENCC FSEFSQLSNL GVDRMEDFSS  240
PSSGDSLFLL DEMLQSWTGN EYCIQEGWLK E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22640.12e-62MYB family protein