PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026436509.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 155aa MW: 17842.4 Da PI: 10.935 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.7 | 2.6e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWTteEde+l ++++ G g+W++ ++ g+ R++k+c++rw++yl XP_026436509.1 14 RGRWTTEEDERLMKYIQHNGEGSWRSLPKNAGLLRCGKSCRLRWLNYL 61 8*******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 53.5 | 5.7e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E+ l++++++ lG++ W++Ia +++ gRt++++k++w+++l XP_026436509.1 67 RGNISADEENLIIKLHNTLGNR-WSLIAGHLP-GRTDNEIKNYWNSHL 112 7899******************.*********.************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 155 aa Download sequence |
MGRAPCCEKV GLKRGRWTTE EDERLMKYIQ HNGEGSWRSL PKNAGLLRCG KSCRLRWLNY 60 LRKDLKRGNI SADEENLIIK LHNTLGNRWS LIAGHLPGRT DNEIKNYWNS HLSRRIESFI 120 RRPSSSNSQS LPIIMDIAKL NGEQKQKGGR TSRAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G47460.1 | 1e-77 | MYB family protein |