PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026436413.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 431aa MW: 48478.7 Da PI: 6.7582

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026436413.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166	1.3e-51	15	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+++yLkkkv+ +k++l +vi++vd++k+ePwd++ k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk + XP_026436413.1 15 VPPGFRFHPTEEELLHYYLKKKVAYEKIDL-DVIRDVDLNKLEPWDIQVKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVI 108 69**************************.9***********964444222455******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +s + + +g++ktLvfykgrap+g+k+dW+mheyrl XP_026436413.1 109 YS-SFKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 143 .8889***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MSEDMSLSVN GQSQVPPGFR FHPTEEELLH YYLKKKVAYE KIDLDVIRDV DLNKLEPWDI 60 QVKCKIGSTP QNDWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKVIYS SFKRIGMRKT 120 LVFYKGRAPH GQKSDWIMHE YRLDDNAVES NVSSNSLIVE GIQEEGWVVC RVFKKKNHQK 180 SVDGPVNNNN SISSSSMMIS KTQLLNSTSS SDGALDQIIH YLGRTCKQES ENNTRFLRQF 240 GRVINDGGVI SDRFMQLPAL ESPTTLQSSS SLHHHTSNNR ILDQEMDSIV YESSIISNQS 300 NNIDEHIYEP AGGLSDWAAL DCVVASHFNN SQSETSKQFA AACFSDSSSL GGFSTSGNEN 360 QELVHHYQSP PQQHQIRQLA TRPSSSMFQT SHVIDYNSEI DLWNFAAGSN RYSSSSMTDP 420 LCSSHVSNPS T

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MSEDMSLSVN GQSQVPPGFR FHPTEEELLH YYLKKKVAYE KIDLDVIRDV DLNKLEPWDI  60
QVKCKIGSTP QNDWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKVIYS SFKRIGMRKT  120
LVFYKGRAPH GQKSDWIMHE YRLDDNAVES NVSSNSLIVE GIQEEGWVVC RVFKKKNHQK  180
SVDGPVNNNN SISSSSMMIS KTQLLNSTSS SDGALDQIIH YLGRTCKQES ENNTRFLRQF  240
GRVINDGGVI SDRFMQLPAL ESPTTLQSSS SLHHHTSNNR ILDQEMDSIV YESSIISNQS  300
NNIDEHIYEP AGGLSDWAAL DCVVASHFNN SQSETSKQFA AACFSDSSSL GGFSTSGNEN  360
QELVHHYQSP PQQHQIRQLA TRPSSSMFQT SHVIDYNSEI DLWNFAAGSN RYSSSSMTDP  420
LCSSHVSNPS T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-102	NAC family protein