PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026436290.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 372aa MW: 42030.9 Da PI: 7.1773

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026436290.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	185	1.7e-57	19	146	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv ++++++ ++i evd++k+ePwdLp ++k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ XP_026436290.1 19 LPPGFRFHPTDEELITHYLSHKVLDTNFNA-RAIGEVDLNKCEPWDLPWRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRG 112 79*************************9.89***********888999************************************9 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++lvg+kktLvfykgrapkgekt+Wvmheyrle XP_026436290.1 113 GKTLVGMKKTLVFYKGRAPKGEKTNWVMHEYRLE 146 9999**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MEASVSVINK LGDDQQMDLP PGFRFHPTDE ELITHYLSHK VLDTNFNARA IGEVDLNKCE 60 PWDLPWRAKM GEKEWYFFCV RDRKYPTGLR TNRATEAGYW KATGKDKEIY RGGKTLVGMK 120 KTLVFYKGRA PKGEKTNWVM HEYRLEGKLS LYNLPKTAKN EWVICRVFQK SSGGKKTIVT 180 GLGRYGGGEE IGTSFLPPLM DSSPFNEKNN SNRFHDAILN HVTCFSNSMA EAAQKNQDDD 240 DNDGIIQYSS TPNLSVNPSM VFSKNPYYDP STQNLSSFQY PVSSGLVHQD HQSNILRVLL 300 ETHNHGSSIK QQQQQNFKAE RDQMISMSQE TGLSTSTADM NNNTNHEISS NHHGPSSTSA 360 AGPVDLDCLF YY

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MEASVSVINK LGDDQQMDLP PGFRFHPTDE ELITHYLSHK VLDTNFNARA IGEVDLNKCE  60
PWDLPWRAKM GEKEWYFFCV RDRKYPTGLR TNRATEAGYW KATGKDKEIY RGGKTLVGMK  120
KTLVFYKGRA PKGEKTNWVM HEYRLEGKLS LYNLPKTAKN EWVICRVFQK SSGGKKTIVT  180
GLGRYGGGEE IGTSFLPPLM DSSPFNEKNN SNRFHDAILN HVTCFSNSMA EAAQKNQDDD  240
DNDGIIQYSS TPNLSVNPSM VFSKNPYYDP STQNLSSFQY PVSSGLVHQD HQSNILRVLL  300
ETHNHGSSIK QQQQQNFKAE RDQMISMSQE TGLSTSTADM NNNTNHEISS NHHGPSSTSA  360
AGPVDLDCLF YY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-123	NAC family protein