PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026436163.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 291aa MW: 33079.8 Da PI: 8.9523

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026436163.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.7	2e-16	17	62	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ XP_026436163.1 17 RGHWRPAEDSKLKELVALYGPQNWNLIAEKIE-GRSGKSCRLRWFNQ 62 899***************************.*********996 PP
2	Myb_DNA-binding	54.4	2.8e-17	69	112	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r++ ++eE+++l da++++G++ W+tIar + gRt++++k++w+ XP_026436163.1 69 RKALSEEEEQRLMDAHRLYGNK-WATIARLFH-GRTDNSVKNHWHV 112 56779***************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MDTNRGTNLF GSKLCSRGHW RPAEDSKLKE LVALYGPQNW NLIAEKIEGR SGKSCRLRWF 60 NQLDPRITRK ALSEEEEQRL MDAHRLYGNK WATIARLFHG RTDNSVKNHW HVIMARKYRE 120 QSSSSSSSYR RRKLSPFLHE SGGAYLGSPM NNNGFCEDQP QSPPQPPPDF FSAAGQKNQD 180 MGNSFNHIKC WEEQQPRNDY RSNFVTCFMP VPTSTYHDLM QQHYQHTTYS HASSKTSTSH 240 VSVTDHYQAS SLSSSASTPI DNNSRVLIAT PYCDTTIAPP PFIDFLGVGA T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	9e-68	MYB family protein