PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026436162.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 304aa MW: 35131.5 Da PI: 8.1699 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.9 | 1.7e-16 | 36 | 81 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ XP_026436162.1 36 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 81 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 56 | 9e-18 | 88 | 131 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r++++++E+++l da++++G++ W+tIar + gRt++++k++w+ XP_026436162.1 88 RKAFSEDEEQRLMDAHRLYGNK-WATIARLFH-GRTDNSVKNHWHV 131 789*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 304 aa Download sequence |
MECNNQNSRD LDGEYHNYHR QNSVSNNNGQ SKLCSRGHWR PAEDSKLKEL VALYGPQNWN 60 LIAEKLEGRS GKSCRLRWFN QLDPMITRKA FSEDEEQRLM DAHRLYGNKW ATIARLFHGR 120 TDNSVKNHWH VIMARKYRER STSSSSYRRR ESTSFLHESS SSYLGSSMNN NRFCEDHLQS 180 PPPAPPRDFF SAAGQKDHIR CTWEVQPRND YCSNFMLPPT STYYHDSMHH HDLLQQEQQQ 240 YQPTTYSHSS SRTSTSHVSV SDHFQASSSS SVDNNNNNNR VIATTYVDTT VTPPFIDFLG 300 VGAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69560.1 | 5e-63 | MYB family protein |