PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026436160.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 372aa MW: 41685 Da PI: 8.0565

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026436160.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.5	2.3e-16	81	126	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ XP_026436160.1 81 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 126 899***************************.*********996 PP
2	Myb_DNA-binding	52.2	1.4e-16	133	176	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r++++++E+++l da++++G++ W+ Ia+ + gRt++++k++w+ XP_026436160.1 133 RKSFSEDEEQRLMDAHRLYGNK-WAMIAKLFH-GRTDNSVKNHWHV 176 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MTSGRVNDVV GYWAGISSLS IHLGNPLLES YYSSTQHRDD HGGNITDSSD GSGTNNNVVV 60 MECNNQNSVS NNNGQSKLCS RGHWRPAEDS KLKELVALYG PQNWNLIAEK LEGRSGKSCR 120 LRWFNQLDPR ITRKSFSEDE EQRLMDAHRL YGNKWAMIAK LFHGRTDNSV KNHWHVIMAR 180 KYRERSTSSS SYRRRESTSF FHESSSSYLG SSSMNNNRFC HPQPPPPPRD FFSGLSFLYL 240 SFGAFLGFCA ASSGQKNLED MGSSFNHISR CTWEVQPRND YCSNFMMPPT STYYPDSMHH 300 HDLMQQHHAS SKTSTSHVSV TDHYQASSIS SSISSSASTL VDNNNNRAIA TAYCDTAIAP 360 PPFIDFLGVG AT

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MTSGRVNDVV GYWAGISSLS IHLGNPLLES YYSSTQHRDD HGGNITDSSD GSGTNNNVVV  60
MECNNQNSVS NNNGQSKLCS RGHWRPAEDS KLKELVALYG PQNWNLIAEK LEGRSGKSCR  120
LRWFNQLDPR ITRKSFSEDE EQRLMDAHRL YGNKWAMIAK LFHGRTDNSV KNHWHVIMAR  180
KYRERSTSSS SYRRRESTSF FHESSSSYLG SSSMNNNRFC HPQPPPPPRD FFSGLSFLYL  240
SFGAFLGFCA ASSGQKNLED MGSSFNHISR CTWEVQPRND YCSNFMMPPT STYYPDSMHH  300
HDLMQQHHAS SKTSTSHVSV TDHYQASSIS SSISSSASTL VDNNNNRAIA TAYCDTAIAP  360
PPFIDFLGVG AT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	1e-64	MYB family protein