PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026435756.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 778aa MW: 87888.5 Da PI: 6.8102

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026435756.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	60.2	3.5e-19	639	735	2	95
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 +kvl++sdv+++ r+vlpkk ae++ +++ + ++ + +ed ++r+W++++++ ++ks++y+l+ ++ +Fv++ngL+egDf+v++ ++ +++ XP_026435756.1 639 QKVLKQSDVGNLWRIVLPKKEAEKYlpELEARDGISIAMEDiGTSRVWNMRYRFwpNNKSRMYLLE-NTGDFVRSNGLQEGDFIVIY--SDiKCG 730 79***********************999999****7778***99777777777777.******************..677999 PP ..EEE CS B3 91 elvvk 95 +++++ XP_026435756.1 731 KFMIR 735 77765 PP

Sequence ? help Back to Top
Protein Sequence Length: 778 aa Download sequence
MKTMHGDGTE QNHQENEEKH DEDDRRRRRD MYEQINPSNN YENTMDWEDE VIGAEDLLHV 60 DDTLMSYGDF PHLPDFPCIS SPSSSSKSCC SSSAPPPTSS VSQRQHHGSV TCRNNSFPSS 120 SATSSASSSA SWAVGKSDHK ERSAVDEKTK NQEYHENRYG NLLSTTDSME IQQDELNRLE 180 SGDCMDVMEG FGEIGLFDTD DIWDPSCLFP YEEEEGFHQP KEDQKCLVDR ETDDNDNDGD 240 QKKNNKPSED LALVFLEWLK SNKETISAED LRSIKLKRST IECAAKRLGG GKEGMKQLLK 300 LILEWVQNNH LQKKRLKEGQ ASSFPSYSSQ QQHQNLNPNS HEFSSFTPPE SNPACFVPTA 360 NPWNVSRNPP PVVPPSTYVS DTMTSGLAVY PPPPPPPPMH NFINGDPLVL VPHFNQSPNP 420 SSADYMFDAS SHLQNWRHHQ PPTPTHHFSL SSHPYSASNH HQDPHAHHLQ QPPPPPPLSR 480 SFSNYHQNQY QSCHQMFQGS NTTTSDGSLI RLGSSATKEA RKKRMARQRK IFSHHQRHAQ 540 NNHQTTDLQQ TRVLNDTTTH HQTLNNSANW VFWSPSPPPP TTVCGSLSPM MMVSEGPSLT 600 VDPPLQPTQS PPNYHKHINM ENRRQGCKPA EKNLKFLLQK VLKQSDVGNL WRIVLPKKEA 660 EKYLPELEAR DGISIAMEDI GTSRVWNMRY RFWPNNKSRM YLLENTGDFV RSNGLQEGDF 720 IVIYSDIKCG KFMIRGVKVR QPGSKSEAKK SAKANRNLHA NSPMCEGPSA SMIKQAVA

Sequence ? help Back to Top

Protein Sequence Length: 778 aa Download sequence

MKTMHGDGTE QNHQENEEKH DEDDRRRRRD MYEQINPSNN YENTMDWEDE VIGAEDLLHV  60
DDTLMSYGDF PHLPDFPCIS SPSSSSKSCC SSSAPPPTSS VSQRQHHGSV TCRNNSFPSS  120
SATSSASSSA SWAVGKSDHK ERSAVDEKTK NQEYHENRYG NLLSTTDSME IQQDELNRLE  180
SGDCMDVMEG FGEIGLFDTD DIWDPSCLFP YEEEEGFHQP KEDQKCLVDR ETDDNDNDGD  240
QKKNNKPSED LALVFLEWLK SNKETISAED LRSIKLKRST IECAAKRLGG GKEGMKQLLK  300
LILEWVQNNH LQKKRLKEGQ ASSFPSYSSQ QQHQNLNPNS HEFSSFTPPE SNPACFVPTA  360
NPWNVSRNPP PVVPPSTYVS DTMTSGLAVY PPPPPPPPMH NFINGDPLVL VPHFNQSPNP  420
SSADYMFDAS SHLQNWRHHQ PPTPTHHFSL SSHPYSASNH HQDPHAHHLQ QPPPPPPLSR  480
SFSNYHQNQY QSCHQMFQGS NTTTSDGSLI RLGSSATKEA RKKRMARQRK IFSHHQRHAQ  540
NNHQTTDLQQ TRVLNDTTTH HQTLNNSANW VFWSPSPPPP TTVCGSLSPM MMVSEGPSLT  600
VDPPLQPTQS PPNYHKHINM ENRRQGCKPA EKNLKFLLQK VLKQSDVGNL WRIVLPKKEA  660
EKYLPELEAR DGISIAMEDI GTSRVWNMRY RFWPNNKSRM YLLENTGDFV RSNGLQEGDF  720
IVIYSDIKCG KFMIRGVKVR QPGSKSEAKK SAKANRNLHA NSPMCEGPSA SMIKQAVA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	24	30	DRRRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	3e-82	B3 family protein