PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026435664.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SBP

Protein Properties

Length: 1041aa MW: 114908 Da PI: 6.5736

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026435664.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.6	5.6e-41	171	248	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC adls+ak yhrrhkvCe+hsk+++ lv + +qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+q XP_026435664.1 171 VCQVEGCGADLSKAKPYHRRHKVCEIHSKTSQSLVGNFMQRFCQQCSRFHLLEEFDEGKRSCRRRLAGHNKRRRKPQR 248 6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1041 aa Download sequence
MGTRYAMKEK DWMGSTGKKS LEWDLNDWKW DGDLFVATPL NSVPFNSREF LSSRGGEVVP 60 VTTNGGGGGS NSSSSCSDEI NLRSGDDNKS KKELEKKRRG VVISDEDDDT ELMNDVAENL 120 TLNLGEHVYP ITQGGDVGGN GKKMKLAENS AATNTAITCT TSTTTTTSRA VCQVEGCGAD 180 LSKAKPYHRR HKVCEIHSKT SQSLVGNFMQ RFCQQCSRFH LLEEFDEGKR SCRRRLAGHN 240 KRRRKPQREA TFNGSSMNDE EARSCLFVTL LKILSNIHSD TSVQPKDEVM LSHVLRNLGS 300 LANGSGVGNT SGIKQGSQDL INEGTFTGAP SKIVDRLFSL GSEPSGCLGS SSKIHGAQEE 360 HVRPANLSVS VAAPGISQVT TSANNLKTVE NDIPSEAEVR NFTAGRIKLN NFDLNCTYVD 420 SQDCVEGLKR SETPLNLLSS SLDCPSWVNQ HSHHSSPPQT SVNSDSASDQ SPSSSSGDAQ 480 TRTDRIVFKL FGKDPNDFPL VLRSQVLDWL SNSPTEIESY IRPGCIMLTI YLRLADSMWE 540 ELCCDLSSSL SRLLDVSSDP FWRKGWVYVR IQHRTAFIFQ GQVVLDMLLP FKEHSGCVIS 600 SIKPLALSVS GSARFIVKGF NLVQPTTRLR CALGGKYLVQ EDVNDLVEGT GTFSEDEELQ 660 SLSFTCSVPD VIGRGFIEVE DDGLNSSSFP FIVAEQDVCS EIRMLEGALE ESESDDDRRR 720 SGRMGSKDQA LSFVHEMGWL LHRCRLRSKV GNMDPNTDMF SFTRFTGLME FAMDHDWCAV 780 VKKLLDILFE GSVDAGDYAS IELALSDMGL LHRAVRRNCR LMVERLLRYV PDTASEKISL 840 GQTQLANRRF LFRPDAIGPG GLTPLHIAAS RIGSESMLDV LTDDPGLVGA VAWKSVRDKT 900 GLTPEGYARM RGHYSYIHLV QKKSNNKSET GHIILNIPPP NASENSNGNQ KQKSEVSDSS 960 EVSGFQFQKT ELSSIPQSCR LCLQKVTYRK RNSFLGYRPT MLSMVSIAAV CVCLGLLFKS 1020 SPEVLYILVP FRWEHLDFGP M

Sequence ? help Back to Top

Protein Sequence Length: 1041 aa Download sequence

MGTRYAMKEK DWMGSTGKKS LEWDLNDWKW DGDLFVATPL NSVPFNSREF LSSRGGEVVP  60
VTTNGGGGGS NSSSSCSDEI NLRSGDDNKS KKELEKKRRG VVISDEDDDT ELMNDVAENL  120
TLNLGEHVYP ITQGGDVGGN GKKMKLAENS AATNTAITCT TSTTTTTSRA VCQVEGCGAD  180
LSKAKPYHRR HKVCEIHSKT SQSLVGNFMQ RFCQQCSRFH LLEEFDEGKR SCRRRLAGHN  240
KRRRKPQREA TFNGSSMNDE EARSCLFVTL LKILSNIHSD TSVQPKDEVM LSHVLRNLGS  300
LANGSGVGNT SGIKQGSQDL INEGTFTGAP SKIVDRLFSL GSEPSGCLGS SSKIHGAQEE  360
HVRPANLSVS VAAPGISQVT TSANNLKTVE NDIPSEAEVR NFTAGRIKLN NFDLNCTYVD  420
SQDCVEGLKR SETPLNLLSS SLDCPSWVNQ HSHHSSPPQT SVNSDSASDQ SPSSSSGDAQ  480
TRTDRIVFKL FGKDPNDFPL VLRSQVLDWL SNSPTEIESY IRPGCIMLTI YLRLADSMWE  540
ELCCDLSSSL SRLLDVSSDP FWRKGWVYVR IQHRTAFIFQ GQVVLDMLLP FKEHSGCVIS  600
SIKPLALSVS GSARFIVKGF NLVQPTTRLR CALGGKYLVQ EDVNDLVEGT GTFSEDEELQ  660
SLSFTCSVPD VIGRGFIEVE DDGLNSSSFP FIVAEQDVCS EIRMLEGALE ESESDDDRRR  720
SGRMGSKDQA LSFVHEMGWL LHRCRLRSKV GNMDPNTDMF SFTRFTGLME FAMDHDWCAV  780
VKKLLDILFE GSVDAGDYAS IELALSDMGL LHRAVRRNCR LMVERLLRYV PDTASEKISL  840
GQTQLANRRF LFRPDAIGPG GLTPLHIAAS RIGSESMLDV LTDDPGLVGA VAWKSVRDKT  900
GLTPEGYARM RGHYSYIHLV QKKSNNKSET GHIILNIPPP NASENSNGNQ KQKSEVSDSS  960
EVSGFQFQKT ELSSIPQSCR LCLQKVTYRK RNSFLGYRPT MLSMVSIAAV CVCLGLLFKS  1020
SPEVLYILVP FRWEHLDFGP M

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	229	246	KRSCRRRLAGHNKRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60030.1	0.0	SBP family protein