PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026435346.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 759aa MW: 86329 Da PI: 6.5603

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026435346.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.7	1e-19	59	152	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+++Ak++GFs+r+++++ + + +t+r+f+C + g+++ + +++ k +r+r+++r+gC a +++ k+ +w++t +++ HnHel XP_026435346.1 59 EFYCSFAKQCGFSIRRHRTRGKdGVGRGVTRRDFTCHCGGYPQMKPSDDGKLQRNRKSSRCGCLAYMRIVKRAdfdVPEWRITGFSNTHNHELL 152 6*************9998874556679***************9***************98887676789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 759 aa Download sequence
MSEGTSLLME TSENGTDMSP DDASTVEEIP ENTILSHQTS VNLVPFIGQR FVSQDAAYEF 60 YCSFAKQCGF SIRRHRTRGK DGVGRGVTRR DFTCHCGGYP QMKPSDDGKL QRNRKSSRCG 120 CLAYMRIVKR ADFDVPEWRI TGFSNTHNHE LLKSSEVGLL PAYCIISADD KTRICMFAKA 180 GMSVRQMLRL MELEKGLKLG CLPFTEIDVR NLLQSFRNVD RDNDAIDLLA MCKNIKDESP 240 DFKYDYKIDV HNRLEHIAWS YSSSLRSYEA FGDAVVFDTT HRLDAYDMSV GIWVGVDNHG 300 MNCFFGCVLL RDENMQSFSW ALKAFLGFMK GKAPQTILTD QNMWLKEAIA TELPTTKHAF 360 CIWHIIAKFS DWFSVLLGSH YDNWKAEFHR LYNLETAEDF EVGWQEMVNA YQLHENKHVV 420 SLYALRSYWA LSYLRRYFFA GLTSTAQSDS INTFIQCFLN AQSQLTQFVH QVGVIAEFRD 480 HAGMKQKMQR KLRKVNLKTG SPIESHAASV LTPYAFSKLQ EEIVLAPQYA SFQIEEGCFH 540 VRHHSQIDGG CKVIWVPTED HISCSCRQFE FSGIVCRHVL HVLSTNNCFN IPDQYLPSRW 600 RIFSLSSSMK SNLATSDMEH GEKFQTLQSM VSTLLAESVG TERLEVACQG ISMVLSSIKE 660 FPRSSSHDLT DVINDSPSDS LILPEVEDSD GIVQSFTAGN THESPIISEK LKERWQKDGH 720 DFCRKRRRSV PCYWQFGLDA TDCPMMGGEG LNVDGLGFL

Sequence ? help Back to Top

Protein Sequence Length: 759 aa Download sequence

MSEGTSLLME TSENGTDMSP DDASTVEEIP ENTILSHQTS VNLVPFIGQR FVSQDAAYEF  60
YCSFAKQCGF SIRRHRTRGK DGVGRGVTRR DFTCHCGGYP QMKPSDDGKL QRNRKSSRCG  120
CLAYMRIVKR ADFDVPEWRI TGFSNTHNHE LLKSSEVGLL PAYCIISADD KTRICMFAKA  180
GMSVRQMLRL MELEKGLKLG CLPFTEIDVR NLLQSFRNVD RDNDAIDLLA MCKNIKDESP  240
DFKYDYKIDV HNRLEHIAWS YSSSLRSYEA FGDAVVFDTT HRLDAYDMSV GIWVGVDNHG  300
MNCFFGCVLL RDENMQSFSW ALKAFLGFMK GKAPQTILTD QNMWLKEAIA TELPTTKHAF  360
CIWHIIAKFS DWFSVLLGSH YDNWKAEFHR LYNLETAEDF EVGWQEMVNA YQLHENKHVV  420
SLYALRSYWA LSYLRRYFFA GLTSTAQSDS INTFIQCFLN AQSQLTQFVH QVGVIAEFRD  480
HAGMKQKMQR KLRKVNLKTG SPIESHAASV LTPYAFSKLQ EEIVLAPQYA SFQIEEGCFH  540
VRHHSQIDGG CKVIWVPTED HISCSCRQFE FSGIVCRHVL HVLSTNNCFN IPDQYLPSRW  600
RIFSLSSSMK SNLATSDMEH GEKFQTLQSM VSTLLAESVG TERLEVACQG ISMVLSSIKE  660
FPRSSSHDLT DVINDSPSDS LILPEVEDSD GIVQSFTAGN THESPIISEK LKERWQKDGH  720
DFCRKRRRSV PCYWQFGLDA TDCPMMGGEG LNVDGLGFL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	724	728	RKRRR
2	724	729	RKRRRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein