PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026434981.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WRKY

Protein Properties

Length: 629aa MW: 68315.8 Da PI: 6.3767

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026434981.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.1	2.4e-30	306	364	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt+a +Cpv+k+v+r+aed +++++tYeg+Hnh+ XP_026434981.1 306 SDGCQWRKYGQKLAKGNPCPRAYYRCTMAaQCPVRKQVQRCAEDRTILITTYEGTHNHP 364 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 629 aa Download sequence
MMDEDDEDEF STVLLSNHHR HHHPAAVIVD SSSSSLPPPI QDADDVDQTP ALKEFNFFSS 60 DNNGSSGKQT HDVHEPVETA NTGLCLLTET GCNSSAEIEG KPQAQQVRMI EVEVNRLKEE 120 NTNLKHMLDH ITNSYNHLQS QVLQIMQQQQ EERQELINRV PEERRIGNGR TSCNPTSSSQ 180 PQPMDSDSFH PATSSSYRGQ IMQPPIETNH HRRSTRSHFR AVTEPKDQLP SPSTNNSKQE 240 RCYDHSGGDD VSDDHTVQQV SRNLRRSSVD SVKNMSMDQQ QEVPEVVHFR KARVSVRARS 300 DAPMISDGCQ WRKYGQKLAK GNPCPRAYYR CTMAAQCPVR KQVQRCAEDR TILITTYEGT 360 HNHPLPPAAT AMANTTSAAA TMLLSGSSTS NYHNSHGFIS SSPAFPYLNT STMAASLSSS 420 APFPTITLDL TQQINSTSTT TQTNHQHHQN NPNVMQFNGQ TGLMPSSQSS SLVQALLNGG 480 AGSHGFSAIQ LLEQQQSAHA MSSLAGSSSG SQGVHLNGQH APSSSTSLVE TVISAAIAND 540 PNLSAALTAA ISSIIAAGGP PERSNHTPIT NNNDNDIPTG NNISNHTTSS FLPANSATNV 600 IDHGVVNPAG LHQQQQHPEQ SCTTTFDPL

Sequence ? help Back to Top

Protein Sequence Length: 629 aa Download sequence

MMDEDDEDEF STVLLSNHHR HHHPAAVIVD SSSSSLPPPI QDADDVDQTP ALKEFNFFSS  60
DNNGSSGKQT HDVHEPVETA NTGLCLLTET GCNSSAEIEG KPQAQQVRMI EVEVNRLKEE  120
NTNLKHMLDH ITNSYNHLQS QVLQIMQQQQ EERQELINRV PEERRIGNGR TSCNPTSSSQ  180
PQPMDSDSFH PATSSSYRGQ IMQPPIETNH HRRSTRSHFR AVTEPKDQLP SPSTNNSKQE  240
RCYDHSGGDD VSDDHTVQQV SRNLRRSSVD SVKNMSMDQQ QEVPEVVHFR KARVSVRARS  300
DAPMISDGCQ WRKYGQKLAK GNPCPRAYYR CTMAAQCPVR KQVQRCAEDR TILITTYEGT  360
HNHPLPPAAT AMANTTSAAA TMLLSGSSTS NYHNSHGFIS SSPAFPYLNT STMAASLSSS  420
APFPTITLDL TQQINSTSTT TQTNHQHHQN NPNVMQFNGQ TGLMPSSQSS SLVQALLNGG  480
AGSHGFSAIQ LLEQQQSAHA MSSLAGSSSG SQGVHLNGQH APSSSTSLVE TVISAAIAND  540
PNLSAALTAA ISSIIAAGGP PERSNHTPIT NNNDNDIPTG NNISNHTTSS FLPANSATNV  600
IDHGVVNPAG LHQQQQHPEQ SCTTTFDPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	9e-50	WRKY family protein