PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026434840.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 380aa MW: 43576.8 Da PI: 5.7963 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.7 | 1.2e-17 | 59 | 106 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll ++++ +G g+W++ a+ g++Rt+k+c++rw++yl XP_026434840.1 59 RGPWTDEEDHLLTNYIANHGEGRWNSLAHAAGLKRTGKSCRLRWLNYL 106 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.7 | 1e-16 | 112 | 155 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++ +++++ q+G++ W++Ia++++ gRt++++k++w++ XP_026434840.1 112 RGNITPEEQLMILELHSQWGNR-WSKIAQYLP-GRTDNEIKNYWRT 155 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 380 aa Download sequence |
MYSSSTTMNN NRRSSAGGGG DSSSSSTTMT TTQSSSDNED MMMMTMDYEQ QQEDLDLRRG 60 PWTDEEDHLL TNYIANHGEG RWNSLAHAAG LKRTGKSCRL RWLNYLRPDV RRGNITPEEQ 120 LMILELHSQW GNRWSKIAQY LPGRTDNEIK NYWRTRVQKH AKQLRCDVNS KLFKDTMRNV 180 WMPRLAERIQ AAADGTSLEA TNTITGHHFN NNIDFTSVAE STNINDMGMI NTNRTNRRRS 240 IKSEDNYTTA KVPASSSTAD SLWTNTGTTQ VPSPVSDLTY DQYQYPFEYN CESTTTQTSH 300 IMNYPEYIMP SPIGYNLNHD FNFQGCTTSS VHEQQNMSNI SGNWLGSDTS STITQDNSLW 360 DYLWNPNQDI MFIQQQQQQF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47190.1 | 1e-83 | MYB family protein |