PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026434508.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HSF

Protein Properties

Length: 367aa MW: 42380.3 Da PI: 4.8782

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026434508.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	101.8	6.2e-32	15	107	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k y++++d +++++isw ++nsf+++d+ f+k++LpkyFkhsnf+SF+RQLn+YgF+k++ ++ F +++F kgkk+ll++ XP_026434508.1 15 FLVKCYDMVDDTNTDSIISWCPSNNSFIIYDMIAFQKELLPKYFKHSNFSSFMRQLNTYGFRKLDPDR---------FIFGNEKFVKGKKQLLKD 100 9******************999**************************************99.........56************ PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i r+k++ XP_026434508.1 101 ISRRKKS 107 **987 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MGKSKGDKDG PLPPFLVKCY DMVDDTNTDS IISWCPSNNS FIIYDMIAFQ KELLPKYFKH 60 SNFSSFMRQL NTYGFRKLDP DRFIFGNEKF VKGKKQLLKD ISRRKKSQEH IEKEPQQTEN 120 KAPVVPPCIE VGMSGLQQEV EILKRDKNVL MQELVKCRQR QQNADIELHC VRQRIKGMEL 180 NQQQMLSLLV MAMQYPRFLS QLVQQKENNW RVSDTRKKRR LPAPVQSNEH VEPEVFEGQI 240 VKYQPLTTES QNSLPAPVLD TAEFKHADPA PIGDDDFFNN IDFTSFVEHL PLPDVPEDLM 300 EQLLSIASPR LQEIDEMEIY TTQNLENEEG IRPKNLDAGG EPVENLDLLT EQMGLLASDE 360 KYMSESP

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MGKSKGDKDG PLPPFLVKCY DMVDDTNTDS IISWCPSNNS FIIYDMIAFQ KELLPKYFKH  60
SNFSSFMRQL NTYGFRKLDP DRFIFGNEKF VKGKKQLLKD ISRRKKSQEH IEKEPQQTEN  120
KAPVVPPCIE VGMSGLQQEV EILKRDKNVL MQELVKCRQR QQNADIELHC VRQRIKGMEL  180
NQQQMLSLLV MAMQYPRFLS QLVQQKENNW RVSDTRKKRR LPAPVQSNEH VEPEVFEGQI  240
VKYQPLTTES QNSLPAPVLD TAEFKHADPA PIGDDDFFNN IDFTSFVEHL PLPDVPEDLM  300
EQLLSIASPR LQEIDEMEIY TTQNLENEEG IRPKNLDAGG EPVENLDLLT EQMGLLASDE  360
KYMSESP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	7e-83	HSF family protein