PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026434207.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

CAMTA

Protein Properties

Length: 1053aa MW: 118507 Da PI: 6.2576

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026434207.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	179.6	3.8e-56	21	137	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 l+ ++rwl++ ei++iL n++++++t e++trp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+e n++fqr XP_026434207.1 21 LEAQTRWLRPAEICEILRNYRNFRITPEPPTRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSIDVLHCYYAHGEGNEKFQR 115 5679***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Lee++ +ivlvhy+ev+ XP_026434207.1 116 RSYWMLEEDYMHIVLVHYREVQ 137 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1053 aa Download sequence
MAETSRRYAL GNHLDIEQIL LEAQTRWLRP AEICEILRNY RNFRITPEPP TRPPSGSLFL 60 FDRKVLRYFR KDGHNWRKKK DGKTVKEAHE RLKAGSIDVL HCYYAHGEGN EKFQRRSYWM 120 LEEDYMHIVL VHYREVQGTK ACYGRNRDTE EVIPSSQNGS PASSSVISNY NQLHSQTIDT 180 TSLNSEQASE YEDAESDNHQ ASSSYHSFPG SQQPDRHVDS GVWSSYYPTY SNSSQGTQPA 240 VQGMNFTQSD RVNGSRVNND VGFELALEPQ KQLGLASWEN VLEGFPSELH KPSVSATQPD 300 TRGVSQQENV LLGKHLGNQF NIKQEVVDRT RGQEKWQGSS DLHSALEQFQ SHTEQQNGHL 360 PQNEFQMQLD AELGSLLKSN LDDNMGIDES VKYSLTDNHP LLGNGKTDEL KKVDSFTRWM 420 TKELGEVEVT NTMSSSITYY DTIQRESPVN DSSLSPQGQL ESYLLSPSLS QHQLFSIIDY 480 SPNWAYTGSD TKVLVTGKFL GRQQDIMKCN WSCMFGEAEV PADVLADGVL RCDAPPHTAG 540 SVPFYITCSN RLACSEVREF EFRVGQFQNS DLADLYNSNS NDMLLHIRLG KMLSLPPFAI 600 LKSLSSGEIP NTSSKISSLM NEDENEWLQM LKLISEEISP GEVKEQLLQK ILKEKLHEWL 660 LYKVAEGGKG PNVLDKEGQG ALHLTAALGY EWAVSPLLAS GVNINFRDGK GLTALHWAAF 720 CGRERTVAAL ISQGAAPGAL TDPTPEFPLG RPPADLASSN GHKGIAGYLA ESALTTHLST 780 LSLKDTNNTD LPETSAIQTA TERVVVPSSD GDASLKHSLT AVCNATQAAA RIYQVFRVQS 840 FQKRQLIEYG NDKFGMSDER ALSLISVKSQ RSRQHDEPVN SAAIHIQNKF RGWKGRKEFL 900 VIRQQVVKIQ AHVRGHQVRK HYKKIIWSVG IVEKAILRWR RKGSGFRRLQ HASIEASISQ 960 SEPSKEDDYD FLREGRKQTE ERLQKALARV KSMVHYPEAR DQYHRLLTVV SEFQEAQTTQ 1020 AKQLNTSEES IDYGDDLDIG ELLDDDTFMQ HEE

Sequence ? help Back to Top

Protein Sequence Length: 1053 aa Download sequence

MAETSRRYAL GNHLDIEQIL LEAQTRWLRP AEICEILRNY RNFRITPEPP TRPPSGSLFL  60
FDRKVLRYFR KDGHNWRKKK DGKTVKEAHE RLKAGSIDVL HCYYAHGEGN EKFQRRSYWM  120
LEEDYMHIVL VHYREVQGTK ACYGRNRDTE EVIPSSQNGS PASSSVISNY NQLHSQTIDT  180
TSLNSEQASE YEDAESDNHQ ASSSYHSFPG SQQPDRHVDS GVWSSYYPTY SNSSQGTQPA  240
VQGMNFTQSD RVNGSRVNND VGFELALEPQ KQLGLASWEN VLEGFPSELH KPSVSATQPD  300
TRGVSQQENV LLGKHLGNQF NIKQEVVDRT RGQEKWQGSS DLHSALEQFQ SHTEQQNGHL  360
PQNEFQMQLD AELGSLLKSN LDDNMGIDES VKYSLTDNHP LLGNGKTDEL KKVDSFTRWM  420
TKELGEVEVT NTMSSSITYY DTIQRESPVN DSSLSPQGQL ESYLLSPSLS QHQLFSIIDY  480
SPNWAYTGSD TKVLVTGKFL GRQQDIMKCN WSCMFGEAEV PADVLADGVL RCDAPPHTAG  540
SVPFYITCSN RLACSEVREF EFRVGQFQNS DLADLYNSNS NDMLLHIRLG KMLSLPPFAI  600
LKSLSSGEIP NTSSKISSLM NEDENEWLQM LKLISEEISP GEVKEQLLQK ILKEKLHEWL  660
LYKVAEGGKG PNVLDKEGQG ALHLTAALGY EWAVSPLLAS GVNINFRDGK GLTALHWAAF  720
CGRERTVAAL ISQGAAPGAL TDPTPEFPLG RPPADLASSN GHKGIAGYLA ESALTTHLST  780
LSLKDTNNTD LPETSAIQTA TERVVVPSSD GDASLKHSLT AVCNATQAAA RIYQVFRVQS  840
FQKRQLIEYG NDKFGMSDER ALSLISVKSQ RSRQHDEPVN SAAIHIQNKF RGWKGRKEFL  900
VIRQQVVKIQ AHVRGHQVRK HYKKIIWSVG IVEKAILRWR RKGSGFRRLQ HASIEASISQ  960
SEPSKEDDYD FLREGRKQTE ERLQKALARV KSMVHYPEAR DQYHRLLTVV SEFQEAQTTQ  1020
AKQLNTSEES IDYGDDLDIG ELLDDDTFMQ HEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein