PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026434183.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 357aa MW: 40108.1 Da PI: 6.4215

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026434183.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.8	4.4e-17	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv ++++G g+W++ ++ g++R++k+c++rw +yl XP_026434183.1 15 KGPWTPEEDQKLVIHIQLHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 62 79********************************************97 PP
2	Myb_DNA-binding	55.6	1.2e-17	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ +++++ lG++ W++Ia +++ gRt++++k++w+++l XP_026434183.1 68 RGKFSQEEEQTILNLHSILGNK-WSAIATHLP-GRTDNEIKNFWNTHL 113 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MGRSPSRDQN NGLKKGPWTP EEDQKLVIHI QLHGHGSWRA LPKLAGLNRC GKSCRLRWTN 60 YLRPDIKRGK FSQEEEQTIL NLHSILGNKW SAIATHLPGR TDNEIKNFWN THLKKKLIQM 120 GFDPMTHRPR TDLFTSLPQL IALASLKEFM DNNNQLPYEE LISRLVQTEA VNEMIRVRYI 180 QSILQSNMAT TNYPTNIADN VQAFNLLNSL SLIKDNSTSS MVNSLSQLDN MAVIPYNDHD 240 LPQLQDYSCN NFQTSLGDIR RDIIASQGGS DFALLNEGEN ITPKTSLGFP SSPADDCIPP 300 TPPTAHRNDR SASSLGEISD ACSTNTTMTT TNTIYGGEVP SLFWPELYSV EDPSFYP

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MGRSPSRDQN NGLKKGPWTP EEDQKLVIHI QLHGHGSWRA LPKLAGLNRC GKSCRLRWTN  60
YLRPDIKRGK FSQEEEQTIL NLHSILGNKW SAIATHLPGR TDNEIKNFWN THLKKKLIQM  120
GFDPMTHRPR TDLFTSLPQL IALASLKEFM DNNNQLPYEE LISRLVQTEA VNEMIRVRYI  180
QSILQSNMAT TNYPTNIADN VQAFNLLNSL SLIKDNSTSS MVNSLSQLDN MAVIPYNDHD  240
LPQLQDYSCN NFQTSLGDIR RDIIASQGGS DFALLNEGEN ITPKTSLGFP SSPADDCIPP  300
TPPTAHRNDR SASSLGEISD ACSTNTTMTT TNTIYGGEVP SLFWPELYSV EDPSFYP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	2e-96	MYB family protein