PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026433711.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 370aa MW: 40966.1 Da PI: 5.4507

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026433711.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.1	8.7e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd lv +++++G+g+W++++ + g+ R+ k+c++rw +yl XP_026433711.1 14 KGPWTPEEDIALVSYIQEHGPGNWRAVPTHTGLLRCSKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	48.2	2.6e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T E++ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l XP_026433711.1 67 RGNFTDHEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MGRPPCCDKT GVKKGPWTPE EDIALVSYIQ EHGPGNWRAV PTHTGLLRCS KSCRLRWTNY 60 LRPGIRRGNF TDHEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLRKKLRKLE 120 SGLGNDGFSS LDQQSAIPKG QWERRLQTDM HTAKKALSDA LSLDDKSLTI PTSFSSSSSQ 180 IYYSDSYFVK ANPPPPPPPQ TTTSSTATYA SSTENISRLL QGWMKNSPKS ASTATTTNSS 240 SSNIGVGAKT TKTESTTSSS DVEGSTSKSE AIDQSIFGFD SSSNSITTPQ SMSSTVDDQA 300 STDLYFQDDE KRKDNQLIMK SENEAVPFSV IENWLFDESI VPQGQEEGGL FQISLGCDDE 360 DDHNNTSEFF

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MGRPPCCDKT GVKKGPWTPE EDIALVSYIQ EHGPGNWRAV PTHTGLLRCS KSCRLRWTNY  60
LRPGIRRGNF TDHEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLRKKLRKLE  120
SGLGNDGFSS LDQQSAIPKG QWERRLQTDM HTAKKALSDA LSLDDKSLTI PTSFSSSSSQ  180
IYYSDSYFVK ANPPPPPPPQ TTTSSTATYA SSTENISRLL QGWMKNSPKS ASTATTTNSS  240
SSNIGVGAKT TKTESTTSSS DVEGSTSKSE AIDQSIFGFD SSSNSITTPQ SMSSTVDDQA  300
STDLYFQDDE KRKDNQLIMK SENEAVPFSV IENWLFDESI VPQGQEEGGL FQISLGCDDE  360
DDHNNTSEFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47600.1	3e-89	MYB family protein