PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026433674.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WRKY

Protein Properties

Length: 639aa MW: 69374.1 Da PI: 6.5107

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026433674.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	89.7	2.4e-28	262	321	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr YYrCt a gCpv+k+v+r+aed+++ ++tYeg+H h+ XP_026433674.1 262 MNDGCQWRKYGQKISKGNPCPREYYRCTVAaGCPVRKQVQRCAEDKSIPITTYEGNHSHP 321 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 639 aa Download sequence
MGDTVMELRS SATNVVNEDH QGNKQQMGAT DESPSCTVEI DQKEEDHNIE IKDRQELEST 60 KVEMSEVRKE NERLKLVLAR ILEDYQSLQK HLVEVVQRGE QTQTNTGATL QTFPFRQTLP 120 IIQAQEESEL VSLSLGRTTS SSSDKFSNYL SKFHKEETDE DKLSKEGNLS LGLDCKYEVI 180 SKPDSSNSTS VDPVMIYPSP ENSFDNDDPK EDAGEKWQTT NNATSNGKAV IRSRDDEVSQ 240 QQQNPVKKPR VSVRTRCETP TMNDGCQWRK YGQKISKGNP CPREYYRCTV AAGCPVRKQV 300 QRCAEDKSIP ITTYEGNHSH PLSVSASAMA STTSVAASML MSGSSNSRLA LASGSSGYTT 360 TSANLHGLNF SNLSSSSATG SKQIFYIPNS SVSSASSSNP TITLDLTTPS SSSLSSLSHL 420 NRPSPNNNYP PSTHKYSSTS FNFSSPSFDQ SKSFTTLPTS WSNGYLRYGS NHQPYKLQNQ 480 TGSLNFSSSR HTQDHQIYQQ YPSLNKNSIS TNPSIAQQSL TEDTIAAAAK ALTSDPVFQS 540 ALASAVTSIV GAGGSGKWPC TDHQFPIIST RPTMLNGNGC GSSYMNVSSM SALASTSSSS 600 NQQGMSMFLQ SSAALPFSSG TKSTTSGSPS MDDSIRDHS

Sequence ? help Back to Top

Protein Sequence Length: 639 aa Download sequence

MGDTVMELRS SATNVVNEDH QGNKQQMGAT DESPSCTVEI DQKEEDHNIE IKDRQELEST  60
KVEMSEVRKE NERLKLVLAR ILEDYQSLQK HLVEVVQRGE QTQTNTGATL QTFPFRQTLP  120
IIQAQEESEL VSLSLGRTTS SSSDKFSNYL SKFHKEETDE DKLSKEGNLS LGLDCKYEVI  180
SKPDSSNSTS VDPVMIYPSP ENSFDNDDPK EDAGEKWQTT NNATSNGKAV IRSRDDEVSQ  240
QQQNPVKKPR VSVRTRCETP TMNDGCQWRK YGQKISKGNP CPREYYRCTV AAGCPVRKQV  300
QRCAEDKSIP ITTYEGNHSH PLSVSASAMA STTSVAASML MSGSSNSRLA LASGSSGYTT  360
TSANLHGLNF SNLSSSSATG SKQIFYIPNS SVSSASSSNP TITLDLTTPS SSSLSSLSHL  420
NRPSPNNNYP PSTHKYSSTS FNFSSPSFDQ SKSFTTLPTS WSNGYLRYGS NHQPYKLQNQ  480
TGSLNFSSSR HTQDHQIYQQ YPSLNKNSIS TNPSIAQQSL TEDTIAAAAK ALTSDPVFQS  540
ALASAVTSIV GAGGSGKWPC TDHQFPIIST RPTMLNGNGC GSSYMNVSSM SALASTSSSS  600
NQQGMSMFLQ SSAALPFSSG TKSTTSGSPS MDDSIRDHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	3e-56	WRKY family protein