PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026432377.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SRS

Protein Properties

Length: 323aa MW: 35883.4 Da PI: 8.4103

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026432377.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	224.8	1.7e-69	96	253	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa......aeaaskrkrel.......kskkqs 84 gt+sCqdCGnqakkdC+h+RCRtCCksrgf C+thvkstWvpa++rrerqqql+a++++++++ + re ++ ++s XP_026432377.1 96 GGTKSCQDCGNQAKKDCVHMRCRTCCKSRGFPCQTHVKSTWVPASRRRERQQQLQALQEQQQQQLrgdhhsR------ARERenpkrlrENPNSS 184 5789***************************************************999999985654432......33332244443344556 PP DUF702 85 alsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +l + ++++++ ++ le+ ++P+e++s+avfrcvrvs++++ +e++aYqtav+igGh+fkGiLydqG+++ XP_026432377.1 185 TLVAHRIPTHH-TSGLEVGNFPAELNSSAVFRCVRVSGIEETDEQYAYQTAVNIGGHLFKGILYDQGPDS 253 66777777776.55999999**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MLMDFLSQLI TRNEEISSSY NNNNNNNSGN KGFELWQSHH HHQQLQRHYQ LQQQQNAYSS 60 SANLEVGPSR STNASDESSS RALTMMMRQS SVGDQGGTKS CQDCGNQAKK DCVHMRCRTC 120 CKSRGFPCQT HVKSTWVPAS RRRERQQQLQ ALQEQQQQQL RGDHHSRARE RENPKRLREN 180 PNSSTLVAHR IPTHHTSGLE VGNFPAELNS SAVFRCVRVS GIEETDEQYA YQTAVNIGGH 240 LFKGILYDQG PDSHYVHGES SSGGAGGSGA TYQQRNLITD STTTANTTTV TVAASASLLD 300 SSLYPTPLNA FMAGTHFFPP PRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	6e-62	SRS family protein