PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026432370.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SRS

Protein Properties

Length: 338aa MW: 37358.8 Da PI: 8.2439

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026432370.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	224.8	1.7e-69	111	268	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa......aeaaskrkrel.......kskkqs 84 gt+sCqdCGnqakkdC+h+RCRtCCksrgf C+thvkstWvpa++rrerqqql+a++++++++ + re ++ ++s XP_026432370.1 111 GGTKSCQDCGNQAKKDCVHMRCRTCCKSRGFPCQTHVKSTWVPASRRRERQQQLQALQEQQQQQLrgdhhsR------ARERenpkrlrENPNSS 199 5789***************************************************999999985654432......33332244443344556 PP DUF702 85 alsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +l + ++++++ ++ le+ ++P+e++s+avfrcvrvs++++ +e++aYqtav+igGh+fkGiLydqG+++ XP_026432370.1 200 TLVAHRIPTHH-TSGLEVGNFPAELNSSAVFRCVRVSGIEETDEQYAYQTAVNIGGHLFKGILYDQGPDS 268 66777777776.55999999**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MAGFSLGGGN NQNPSHEIHP DALFLYRNEE ISSSYNNNNN NNSGNKGFEL WQSHHHHQQL 60 QRHYQLQQQQ NAYSSSANLE VGPSRSTNAS DESSSRALTM MMRQSSVGDQ GGTKSCQDCG 120 NQAKKDCVHM RCRTCCKSRG FPCQTHVKST WVPASRRRER QQQLQALQEQ QQQQLRGDHH 180 SRARERENPK RLRENPNSST LVAHRIPTHH TSGLEVGNFP AELNSSAVFR CVRVSGIEET 240 DEQYAYQTAV NIGGHLFKGI LYDQGPDSHY VHGESSSGGA GGSGATYQQR NLITDSTTTA 300 NTTTVTVAAS ASLLDSSLYP TPLNAFMAGT HFFPPPRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	1e-61	SRS family protein