PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026432023.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 319aa    MW: 35551.7 Da    PI: 9.1127
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026432023.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA62.93.7e-20186220135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nC tt+TplWR+gp+g+k+LCnaCG++y+k+++
  XP_026432023.1 186 CANCDTTSTPLWRNGPRGPKSLCNACGIRYKKEER 220
                     ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MQRCSSNTSS YQYCSHHPVG TCSCHLYQPH HHHHQSTSSS HQPSSGKNPF TMLFSSSSTA  60
NTKTCSTQYS NPNYQNSKSF DELDYHSYPI ITSSSPSSAV DCTLSLGTPS TRKTNNSVTI  120
DNHRKSTSCL TSSSKYYKSW DVFQPNSKNH HQEQQRHASS TAHNIKNIIS RGYNSVNRDQ  180
TIGRRCANCD TTSTPLWRNG PRGPKSLCNA CGIRYKKEER RATASTITTS NVNVNGAVGE  240
VMSHPNQQSW APHHSQTQPR LSTSAYPTSS TTSHYHEFRF IGDEDCYHHH SNINTSTAGG  300
GGIPNLLSWR QPTLVHHYT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.12e-31GATA family protein