PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026431261.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 305aa    MW: 35056.1 Da    PI: 6.5098
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026431261.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.46.4e-1916107198
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     ffk++  +   +++rl++p  f+++   +   +     +le +sg sW v++  +k+ ++++l +GW+ Fv++n Lk  Df+vF++dg ++f  +
  XP_026431261.1  16 FFKIF--HEEEQKRRLRIPVAFCSRLptE--YPACEWAILEGPSGASWIVEV--NKTENGTFLDEGWELFVQENCLKKYDFLVFRHDGGMQF--L 102
                     78888..77788889********999643..34556999*************..********************************999999..* PP

                     EEEE- CS
              B3  94 vkvfr 98 
                     vkvf+
  XP_026431261.1 103 VKVFK 107
                     **997 PP
2B366.92.9e-212022861293
                     HTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS
              B3  12 ksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelv 93 
                       +r+++p kfa++h      g    e ++++l++e+g++We+ ++ +   ++y+++kGWk F+ +n+Lk gDfv+F+l++r  + ++v
  XP_026431261.1 202 YGDRMTIPVKFARKHfpakvnG---GEITEVMLQNEEGQTWELHVR-TTAHDQYLFSKGWKIFATDNNLKIGDFVIFELIDRlPDSKFV 286
                     5689************996643...24468***************5.444457**************************9987776655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MENKIVEPAA ERKHHFFKIF HEEEQKRRLR IPVAFCSRLP TEYPACEWAI LEGPSGASWI  60
VEVNKTENGT FLDEGWELFV QENCLKKYDF LVFRHDGGMQ FLVKVFKGNG CPREECFAPA  120
LSPILAQESH GPPEECITPV VSPLGRERKR HASPCGNSML KMRDSSSQEM LASAATAVKR  180
KVISSRSSFP FFWTCVNRFN VYGDRMTIPV KFARKHFPAK VNGGEITEVM LQNEEGQTWE  240
LHVRTTAHDQ YLFSKGWKIF ATDNNLKIGD FVIFELIDRL PDSKFVMNFH IYPVPVIFED  300
DADED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31680.12e-17B3 family protein