PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026431229.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 283aa    MW: 31930.3 Da    PI: 4.5945
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026431229.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260120.78.2e-387106199
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC ++Cv+apyf++eq + +fa++hk+FGasnv+kll++lp  +r +a+ ++ yeA+ar++dPvyG+v+ i++lqqq+ +l+++l
  XP_026431229.1   7 PCGACKFLRRKCLRGCVFAPYFCHEQgATHFAAIHKVFGASNVSKLLTHLPLGDRCEAAVTISYEAQARIQDPVYGCVAQIFALQQQVVSLQEQL 101
                     7*************************89******************************************************************* PP

          DUF260  95 allke 99 
                      +l++
  XP_026431229.1 102 TTLRA 106
                     99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MTGFGSPCGA CKFLRRKCLR GCVFAPYFCH EQGATHFAAI HKVFGASNVS KLLTHLPLGD  60
RCEAAVTISY EAQARIQDPV YGCVAQIFAL QQQVVSLQEQ LTTLRAEQAA QGFVNGGNIT  120
TSTNDHIHQQ DNHNKLFYGD FPTTYPQDIE ALNMQLNESK ILSEQLYQNN TSMNDSNSTA  180
TTDEENMFYY ENGVVNMENS PSIQMSQEYH DRDSFTPPEE TVHQFMTGAS LDEQYYASDE  240
HQQHAAMASL YLEDMQMDAT KWTFQGTNKD DLQSMAFPYF QHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.12e-53LBD family protein