PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026431225.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 282aa    MW: 31636.8 Da    PI: 4.8248
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026431225.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260122.91.6e-3871071100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC+++Cv+apyf++eq + +fa++hk+FGasnv+kll++lp   r +a+ ++ yeA+ar++dPvyG+v++i++lqqq+ +l+++l
  XP_026431225.1   7 PCGACKFLRRKCVRGCVFAPYFCHEQgATHFAAIHKVFGASNVSKLLTHLPLGGRCEAAVTISYEAQARIQDPVYGCVSHIFALQQQVVSLQEQL 101
                     7*************************89******************************************************************* PP

          DUF260  95 allkee 100
                      +lk++
  XP_026431225.1 102 TTLKAQ 107
                     999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MTGFGSPCGA CKFLRRKCVR GCVFAPYFCH EQGATHFAAI HKVFGASNVS KLLTHLPLGG  60
RCEAAVTISY EAQARIQDPV YGCVSHIFAL QQQVVSLQEQ LTTLKAQQAA HCFGNGGNIT  120
TSTNDHIHQH DNHNKLFYGD FPTTYPPGIE ALYMQLNESK ISSEQLYQSN TSMNDSNSTA  180
TTDDENIFYY ENGVVNMENS PSNQASQEYD DPESFTPPEE TIHQFMTSSS FDEQYSYDEL  240
HQHAAMASLY LEDLQMNSRN WTFQETNQVD LQSTAFAYLQ HS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.12e-53LBD family protein