PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026431071.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

CAMTA

Protein Properties

Length: 889aa MW: 102046 Da PI: 8.4896

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026431071.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	155.3	1.2e-48	32	145	3	116
CG-1 3 kekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 + ++rw +++e++aiL n++++ +++++ + pk g+++Ly+rkk+r frkDG++w+kkkdgktv+E+he+LKvg e +++yY+h+ +np++ rr XP_026431071.1 32 DANERWFRPNEVHAILSNYKHFGIHHKPVNLPKGGTIVLYDRKKLRAFRKDGHNWRKKKDGKTVQEAHEHLKVGREERIHVYYVHGLDNPNLARR 126 3489***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhyle 116 cywlL++++e+iv+vhy+e XP_026431071.1 127 CYWLLDKKQEDIVFVHYRE 145 ***************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 889 aa Download sequence
MESSVNGNRL VGWEIHGFLT MKDLDIQKLL EDANERWFRP NEVHAILSNY KHFGIHHKPV 60 NLPKGGTIVL YDRKKLRAFR KDGHNWRKKK DGKTVQEAHE HLKVGREERI HVYYVHGLDN 120 PNLARRCYWL LDKKQEDIVF VHYRELEQVQ SSPSTPHNSN SNSAHCLNAS VPKVLADEKS 180 CWESHASNSN GVSYEQQNQY NVRNSKSDTS DYSQARNITV QTNDFQSATG DESSSMLIKE 240 SLQNEESFEV FLDSFMADAS DLSDLPDDSS LLTSHNESGT SMIMNHQLQT IKPLFTITNI 300 SPSWAYSTEQ TKIIAIGYFH GAYLHIDDTR MFCVFGDVCS PAEKIAMGVF RCTSFPRYPG 360 FVNFYLSLDG YTPISQVLSF EYRFPPVERM ALLNEHPKQE EFQLQLRLLH LLFSSSNILR 420 VLSRKSTSAY SDTKLLPSVS SSIDKDWEFL KESIQHNKIS MSQSKNMLTE FTLKSKLKEW 480 ILERVVEGRK TSARDNHGLG IIHLCTLLDY KWAVQLYSRS GLSLDFRDAF GWTALHWAAF 540 YGRKEMVAVL LSEGADPSLV TDPTSQFPGG CTAADIASRN GHEGIAAYLA KQGLITQFML 600 MSVSENTTGP LQTQKSYSVD PRNLSEEQLC QKDAFDAYEI STDVASRIQE AFWKDLVSKT 660 KTMTIQDTEE DYVTNADLAS LSLHSPEAIR HTQMFTEACY TMAAMKIQHA LRIYMIRKRM 720 KAASRIQHQF LTWRIRKDFL NKRLQVVKLQ ANFRGHRARN QVNRIVWAVG MLEKAILRWR 780 QKGKGLRGLI LPQSTENVQE GIQAEYGLHE DFFLDSRKQT EERLSRAVIC VQSMYRSKRA 840 QEEYRMMKLS HDREKLERRQ MQQACKSPLS VSLEKVENRG SAHTVNNLL

Sequence ? help Back to Top

Protein Sequence Length: 889 aa Download sequence

MESSVNGNRL VGWEIHGFLT MKDLDIQKLL EDANERWFRP NEVHAILSNY KHFGIHHKPV  60
NLPKGGTIVL YDRKKLRAFR KDGHNWRKKK DGKTVQEAHE HLKVGREERI HVYYVHGLDN  120
PNLARRCYWL LDKKQEDIVF VHYRELEQVQ SSPSTPHNSN SNSAHCLNAS VPKVLADEKS  180
CWESHASNSN GVSYEQQNQY NVRNSKSDTS DYSQARNITV QTNDFQSATG DESSSMLIKE  240
SLQNEESFEV FLDSFMADAS DLSDLPDDSS LLTSHNESGT SMIMNHQLQT IKPLFTITNI  300
SPSWAYSTEQ TKIIAIGYFH GAYLHIDDTR MFCVFGDVCS PAEKIAMGVF RCTSFPRYPG  360
FVNFYLSLDG YTPISQVLSF EYRFPPVERM ALLNEHPKQE EFQLQLRLLH LLFSSSNILR  420
VLSRKSTSAY SDTKLLPSVS SSIDKDWEFL KESIQHNKIS MSQSKNMLTE FTLKSKLKEW  480
ILERVVEGRK TSARDNHGLG IIHLCTLLDY KWAVQLYSRS GLSLDFRDAF GWTALHWAAF  540
YGRKEMVAVL LSEGADPSLV TDPTSQFPGG CTAADIASRN GHEGIAAYLA KQGLITQFML  600
MSVSENTTGP LQTQKSYSVD PRNLSEEQLC QKDAFDAYEI STDVASRIQE AFWKDLVSKT  660
KTMTIQDTEE DYVTNADLAS LSLHSPEAIR HTQMFTEACY TMAAMKIQHA LRIYMIRKRM  720
KAASRIQHQF LTWRIRKDFL NKRLQVVKLQ ANFRGHRARN QVNRIVWAVG MLEKAILRWR  780
QKGKGLRGLI LPQSTENVQE GIQAEYGLHE DFFLDSRKQT EERLSRAVIC VQSMYRSKRA  840
QEEYRMMKLS HDREKLERRQ MQQACKSPLS VSLEKVENRG SAHTVNNLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	73	90	RKKLRAFRKDGHNWRKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16940.1	0.0	CAMTA family protein