PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026430451.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 272aa MW: 31648.7 Da PI: 9.6284

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026430451.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.1	4.9e-14	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W ++Ed+ll ++++++G +W ++ + g+ R++k+c++rw++yl XP_026430451.1 17 KGPWAEDEDLLLRKCIEKHGASRWGQVPLKAGLSRCRKSCRLRWLNYL 64 79********************************************97 PP
2	Myb_DNA-binding	40.7	5.7e-13	70	115	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + ++E +l+++ +k+lG++ W++Ia +++ gRt++++k++++++l XP_026430451.1 70 RGEFEADEVDLIARMHKLLGNR-WSLIAGRVQ-GRTANDIKNFYNTHL 115 79999***************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MEKNSSLVLS SSKGLKKGPW AEDEDLLLRK CIEKHGASRW GQVPLKAGLS RCRKSCRLRW 60 LNYLDPNIKR GEFEADEVDL IARMHKLLGN RWSLIAGRVQ GRTANDIKNF YNTHLKKKCF 120 SKQSQLQKNK QKKRRRPLRP ITDDSHMTVT KVLRPQPRTF SKTSHWIKNK ESTPVAGMPN 180 ENMNNNLNTT TARLLEDSND HEDQLTKNSL SLNDLDRFSS KNVSSSDDYY CNFDDDQRVK 240 EVGDYLNNDD LYLIDDLWRM LEENQDGQYL TI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	116	136	KKKCFSKQSQLQKNKQKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	7e-50	MYB family protein